Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Slc6a11P31650 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc6a11P31650 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc6a11P31650 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc6a11P31650 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc6a11P31650 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc6a11P31650 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
Slc6a11P31650 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Slc6a11P31650 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Slc6a11P31650 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc6a11P31650 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc6a11P31650 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc6a11P31650 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Slc6a11P31650 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc6a11P31650 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Slc6a11P31650 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Slc6a11P31650 Gm18101-201ENSMUST00000215769 548 ntBASIC15.55■□□□□ 0.08
Slc6a11P31650 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.55■□□□□ 0.08
Slc6a11P31650 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc6a11P31650 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc6a11P31650 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc6a11P31650 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc6a11P31650 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Slc6a11P31650 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc6a11P31650 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC15.55■□□□□ 0.08
Slc6a11P31650 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.55■□□□□ 0.08
Slc6a11P31650 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a11P31650 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a11P31650 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a11P31650 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a11P31650 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.54■□□□□ 0.08
Slc6a11P31650 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a11P31650 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a11P31650 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a11P31650 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a11P31650 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a11P31650 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC15.54■□□□□ 0.08
Slc6a11P31650 Mir5130-201ENSMUST00000175160 84 ntBASIC15.54■□□□□ 0.08
Slc6a11P31650 Gm9731-201ENSMUST00000209480 747 ntBASIC15.54■□□□□ 0.08
Slc6a11P31650 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Slc6a11P31650 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a11P31650 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a11P31650 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a11P31650 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a11P31650 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a11P31650 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.54■□□□□ 0.08
Slc6a11P31650 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Slc6a11P31650 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a11P31650 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Slc6a11P31650 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Slc6a11P31650 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc6a11P31650 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Slc6a11P31650 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Slc6a11P31650 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc6a11P31650 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc6a11P31650 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.53■□□□□ 0.08
Slc6a11P31650 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc6a11P31650 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Slc6a11P31650 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc6a11P31650 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc6a11P31650 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Slc6a11P31650 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Slc6a11P31650 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc6a11P31650 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc6a11P31650 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc6a11P31650 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc6a11P31650 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc6a11P31650 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.53■□□□□ 0.08
Slc6a11P31650 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc6a11P31650 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc6a11P31650 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Slc6a11P31650 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc6a11P31650 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc6a11P31650 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc6a11P31650 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Slc6a11P31650 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.08
Slc6a11P31650 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.52■□□□□ 0.08
Slc6a11P31650 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Slc6a11P31650 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Slc6a11P31650 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Slc6a11P31650 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Slc6a11P31650 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Slc6a11P31650 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Slc6a11P31650 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Slc6a11P31650 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Slc6a11P31650 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Slc6a11P31650 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC15.52■□□□□ 0.08
Slc6a11P31650 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.52■□□□□ 0.08
Slc6a11P31650 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
Slc6a11P31650 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Slc6a11P31650 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.52■□□□□ 0.07
Slc6a11P31650 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Slc6a11P31650 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Slc6a11P31650 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Slc6a11P31650 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Slc6a11P31650 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Slc6a11P31650 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Slc6a11P31650 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Slc6a11P31650 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Slc6a11P31650 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms