Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.27■□□□□ 0.2
Nckap1P28660 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.27■□□□□ 0.2
Nckap1P28660 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nckap1P28660 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Nckap1P28660 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nckap1P28660 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Nckap1P28660 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nckap1P28660 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Nckap1P28660 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nckap1P28660 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Nckap1P28660 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.27■□□□□ 0.19
Nckap1P28660 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nckap1P28660 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Nckap1P28660 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.26■□□□□ 0.19
Nckap1P28660 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.26■□□□□ 0.19
Nckap1P28660 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Nckap1P28660 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
Nckap1P28660 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Nckap1P28660 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Nckap1P28660 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
Nckap1P28660 Gm6443-201ENSMUST00000203599 874 ntBASIC16.26■□□□□ 0.19
Nckap1P28660 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.26■□□□□ 0.19
Nckap1P28660 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nckap1P28660 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.26■□□□□ 0.19
Nckap1P28660 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nckap1P28660 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nckap1P28660 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Nckap1P28660 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nckap1P28660 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Nckap1P28660 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Nckap1P28660 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nckap1P28660 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nckap1P28660 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nckap1P28660 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nckap1P28660 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Nckap1P28660 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nckap1P28660 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nckap1P28660 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nckap1P28660 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nckap1P28660 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
Nckap1P28660 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nckap1P28660 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.25■□□□□ 0.19
Nckap1P28660 Gm18733-201ENSMUST00000173950 856 ntBASIC16.25■□□□□ 0.19
Nckap1P28660 Gm27867-201ENSMUST00000184778 125 ntBASIC16.25■□□□□ 0.19
Nckap1P28660 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nckap1P28660 Rps4l-201ENSMUST00000071745 943 ntBASIC16.25■□□□□ 0.19
Nckap1P28660 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nckap1P28660 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nckap1P28660 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nckap1P28660 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nckap1P28660 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nckap1P28660 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nckap1P28660 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nckap1P28660 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nckap1P28660 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.25■□□□□ 0.19
Nckap1P28660 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nckap1P28660 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nckap1P28660 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nckap1P28660 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nckap1P28660 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Nckap1P28660 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nckap1P28660 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.24■□□□□ 0.19
Nckap1P28660 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nckap1P28660 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.24■□□□□ 0.19
Nckap1P28660 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.24■□□□□ 0.19
Nckap1P28660 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nckap1P28660 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.24■□□□□ 0.19
Nckap1P28660 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Nckap1P28660 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.24■□□□□ 0.19
Nckap1P28660 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Nckap1P28660 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nckap1P28660 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.24■□□□□ 0.19
Nckap1P28660 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.24■□□□□ 0.19
Nckap1P28660 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nckap1P28660 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Nckap1P28660 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nckap1P28660 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Nckap1P28660 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nckap1P28660 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nckap1P28660 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nckap1P28660 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nckap1P28660 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nckap1P28660 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nckap1P28660 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nckap1P28660 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Nckap1P28660 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nckap1P28660 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nckap1P28660 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nckap1P28660 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nckap1P28660 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nckap1P28660 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.23■□□□□ 0.19
Nckap1P28660 Gm43514-201ENSMUST00000198852 424 ntBASIC16.23■□□□□ 0.19
Nckap1P28660 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nckap1P28660 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.23■□□□□ 0.19
Nckap1P28660 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nckap1P28660 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nckap1P28660 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nckap1P28660 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nckap1P28660 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nckap1P28660 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms