Protein–RNA interactions for Protein: P28235

Gja4, Gap junction alpha-4 protein, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gja4P28235 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Gja4P28235 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gja4P28235 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gja4P28235 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.33■□□□□ 0.2
Gja4P28235 Gm11594-201ENSMUST00000122313 162 ntBASIC16.33■□□□□ 0.2
Gja4P28235 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gja4P28235 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.33■□□□□ 0.2
Gja4P28235 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.33■□□□□ 0.2
Gja4P28235 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.33■□□□□ 0.2
Gja4P28235 Gm6089-201ENSMUST00000197666 938 ntBASIC16.33■□□□□ 0.2
Gja4P28235 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
Gja4P28235 Gm8655-201ENSMUST00000221159 852 ntBASIC16.33■□□□□ 0.2
Gja4P28235 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.33■□□□□ 0.2
Gja4P28235 Psmb5-202ENSMUST00000227257 622 ntBASIC16.33■□□□□ 0.2
Gja4P28235 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gja4P28235 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gja4P28235 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Gja4P28235 Gm15590-201ENSMUST00000078419 552 ntBASIC16.33■□□□□ 0.2
Gja4P28235 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gja4P28235 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gja4P28235 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Gja4P28235 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Gja4P28235 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gja4P28235 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Gja4P28235 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gja4P28235 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
Gja4P28235 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gja4P28235 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Gja4P28235 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gja4P28235 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gja4P28235 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Gja4P28235 Gm11779-201ENSMUST00000118541 368 ntBASIC16.32■□□□□ 0.2
Gja4P28235 Gm11780-201ENSMUST00000136880 516 ntBASIC16.32■□□□□ 0.2
Gja4P28235 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gja4P28235 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Gja4P28235 Gm9172-201ENSMUST00000212092 954 ntBASIC16.32■□□□□ 0.2
Gja4P28235 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gja4P28235 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.32■□□□□ 0.2
Gja4P28235 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gja4P28235 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gja4P28235 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gja4P28235 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gja4P28235 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Gja4P28235 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gja4P28235 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gja4P28235 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gja4P28235 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gja4P28235 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gja4P28235 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gja4P28235 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gja4P28235 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Gja4P28235 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gja4P28235 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC16.31■□□□□ 0.2
Gja4P28235 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gja4P28235 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gja4P28235 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gja4P28235 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gja4P28235 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.31■□□□□ 0.2
Gja4P28235 Gm25406-201ENSMUST00000157599 105 ntBASIC16.31■□□□□ 0.2
Gja4P28235 Gm25925-201ENSMUST00000158314 306 ntBASIC16.31■□□□□ 0.2
Gja4P28235 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gja4P28235 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gja4P28235 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.31■□□□□ 0.2
Gja4P28235 AV026068-213ENSMUST00000223675 1171 ntBASIC16.31■□□□□ 0.2
Gja4P28235 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gja4P28235 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gja4P28235 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gja4P28235 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gja4P28235 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gja4P28235 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gja4P28235 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Gja4P28235 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Gja4P28235 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Gja4P28235 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Gja4P28235 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gja4P28235 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Gja4P28235 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gja4P28235 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Gja4P28235 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Gja4P28235 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
Gja4P28235 Gm6550-201ENSMUST00000187574 993 ntBASIC16.3■□□□□ 0.2
Gja4P28235 Gm5264-201ENSMUST00000190584 848 ntBASIC16.3■□□□□ 0.2
Gja4P28235 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.3■□□□□ 0.2
Gja4P28235 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.3■□□□□ 0.2
Gja4P28235 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gja4P28235 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gja4P28235 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gja4P28235 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gja4P28235 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gja4P28235 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gja4P28235 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.3■□□□□ 0.2
Gja4P28235 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gja4P28235 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gja4P28235 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gja4P28235 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Gja4P28235 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.29■□□□□ 0.2
Gja4P28235 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gja4P28235 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gja4P28235 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Gja4P28235 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms