Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Col8a2P25318 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col8a2P25318 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col8a2P25318 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col8a2P25318 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.66□□□□□ -0.22
Col8a2P25318 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col8a2P25318 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col8a2P25318 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col8a2P25318 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col8a2P25318 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col8a2P25318 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col8a2P25318 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC13.65□□□□□ -0.22
Col8a2P25318 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col8a2P25318 Gm12895-201ENSMUST00000122214 226 ntBASIC13.65□□□□□ -0.22
Col8a2P25318 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col8a2P25318 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.65□□□□□ -0.22
Col8a2P25318 AC153794.1-201ENSMUST00000169148 126 ntBASIC13.65□□□□□ -0.22
Col8a2P25318 Gm27867-201ENSMUST00000184778 125 ntBASIC13.65□□□□□ -0.22
Col8a2P25318 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col8a2P25318 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col8a2P25318 AC133598.3-202ENSMUST00000224219 531 ntBASIC13.65□□□□□ -0.22
Col8a2P25318 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col8a2P25318 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col8a2P25318 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col8a2P25318 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col8a2P25318 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Col8a2P25318 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Col8a2P25318 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Col8a2P25318 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col8a2P25318 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col8a2P25318 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col8a2P25318 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col8a2P25318 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col8a2P25318 Gm8839-201ENSMUST00000121279 1645 ntBASIC13.64□□□□□ -0.23
Col8a2P25318 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Col8a2P25318 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col8a2P25318 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col8a2P25318 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col8a2P25318 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col8a2P25318 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col8a2P25318 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col8a2P25318 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col8a2P25318 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col8a2P25318 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col8a2P25318 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.64□□□□□ -0.23
Col8a2P25318 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col8a2P25318 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col8a2P25318 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col8a2P25318 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col8a2P25318 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col8a2P25318 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col8a2P25318 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col8a2P25318 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col8a2P25318 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Col8a2P25318 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC13.64□□□□□ -0.23
Col8a2P25318 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col8a2P25318 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Col8a2P25318 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col8a2P25318 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col8a2P25318 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col8a2P25318 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col8a2P25318 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col8a2P25318 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC13.64□□□□□ -0.23
Col8a2P25318 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col8a2P25318 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col8a2P25318 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Col8a2P25318 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Col8a2P25318 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col8a2P25318 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col8a2P25318 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC13.63□□□□□ -0.23
Col8a2P25318 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col8a2P25318 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col8a2P25318 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col8a2P25318 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col8a2P25318 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col8a2P25318 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col8a2P25318 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Col8a2P25318 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
Col8a2P25318 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC13.63□□□□□ -0.23
Col8a2P25318 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col8a2P25318 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col8a2P25318 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col8a2P25318 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.63□□□□□ -0.23
Col8a2P25318 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col8a2P25318 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col8a2P25318 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col8a2P25318 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col8a2P25318 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col8a2P25318 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col8a2P25318 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col8a2P25318 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col8a2P25318 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col8a2P25318 Gm10461-201ENSMUST00000202073 4786 ntBASIC13.62□□□□□ -0.23
Col8a2P25318 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col8a2P25318 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col8a2P25318 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col8a2P25318 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col8a2P25318 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Col8a2P25318 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC13.62□□□□□ -0.23
Col8a2P25318 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms