Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxd8P23463 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxd8P23463 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxd8P23463 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Hoxd8P23463 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxd8P23463 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.84■□□□□ 0.29
Hoxd8P23463 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxd8P23463 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Hoxd8P23463 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Hoxd8P23463 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Hoxd8P23463 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Hoxd8P23463 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hoxd8P23463 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Hoxd8P23463 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Hoxd8P23463 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.83■□□□□ 0.28
Hoxd8P23463 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.83■□□□□ 0.28
Hoxd8P23463 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.83■□□□□ 0.28
Hoxd8P23463 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Hoxd8P23463 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.83■□□□□ 0.28
Hoxd8P23463 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.83■□□□□ 0.28
Hoxd8P23463 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hoxd8P23463 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hoxd8P23463 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Hoxd8P23463 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hoxd8P23463 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hoxd8P23463 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hoxd8P23463 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hoxd8P23463 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Hoxd8P23463 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hoxd8P23463 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.82■□□□□ 0.28
Hoxd8P23463 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxd8P23463 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.82■□□□□ 0.28
Hoxd8P23463 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.82■□□□□ 0.28
Hoxd8P23463 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxd8P23463 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxd8P23463 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxd8P23463 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
Hoxd8P23463 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Hoxd8P23463 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxd8P23463 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
Hoxd8P23463 Gm27628-201ENSMUST00000184911 107 ntBASIC16.82■□□□□ 0.28
Hoxd8P23463 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.82■□□□□ 0.28
Hoxd8P23463 Gm43438-201ENSMUST00000198133 379 ntBASIC16.82■□□□□ 0.28
Hoxd8P23463 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.82■□□□□ 0.28
Hoxd8P23463 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Hoxd8P23463 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxd8P23463 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxd8P23463 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.82■□□□□ 0.28
Hoxd8P23463 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxd8P23463 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxd8P23463 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Hoxd8P23463 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxd8P23463 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxd8P23463 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxd8P23463 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Hoxd8P23463 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxd8P23463 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxd8P23463 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxd8P23463 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxd8P23463 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Hoxd8P23463 Gm14140-201ENSMUST00000119999 995 ntBASIC16.81■□□□□ 0.28
Hoxd8P23463 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.81■□□□□ 0.28
Hoxd8P23463 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.81■□□□□ 0.28
Hoxd8P23463 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.81■□□□□ 0.28
Hoxd8P23463 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxd8P23463 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxd8P23463 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxd8P23463 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxd8P23463 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxd8P23463 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxd8P23463 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Hoxd8P23463 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxd8P23463 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxd8P23463 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxd8P23463 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxd8P23463 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxd8P23463 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Hoxd8P23463 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxd8P23463 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.8■□□□□ 0.28
Hoxd8P23463 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxd8P23463 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Hoxd8P23463 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxd8P23463 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.8■□□□□ 0.28
Hoxd8P23463 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.8■□□□□ 0.28
Hoxd8P23463 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.8■□□□□ 0.28
Hoxd8P23463 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC16.8■□□□□ 0.28
Hoxd8P23463 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.8■□□□□ 0.28
Hoxd8P23463 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.8■□□□□ 0.28
Hoxd8P23463 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.8■□□□□ 0.28
Hoxd8P23463 Gm11764-201ENSMUST00000120221 623 ntBASIC16.8■□□□□ 0.28
Hoxd8P23463 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.8■□□□□ 0.28
Hoxd8P23463 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Hoxd8P23463 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxd8P23463 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.8■□□□□ 0.28
Hoxd8P23463 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.8■□□□□ 0.28
Hoxd8P23463 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.8■□□□□ 0.28
Hoxd8P23463 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.8■□□□□ 0.28
Hoxd8P23463 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.8■□□□□ 0.28
Hoxd8P23463 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.8■□□□□ 0.28
Hoxd8P23463 Gm8825-201ENSMUST00000182565 998 ntBASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms