Protein–RNA interactions for Protein: P21107

Tpm3, Tropomyosin alpha-3 chain, mousemouse

Known RBP Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3P21107 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Tpm3P21107 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Tpm3P21107 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC18.42■□□□□ 0.54
Tpm3P21107 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tpm3P21107 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tpm3P21107 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Tpm3P21107 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tpm3P21107 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tpm3P21107 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tpm3P21107 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tpm3P21107 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tpm3P21107 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Tpm3P21107 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Tpm3P21107 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tpm3P21107 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tpm3P21107 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Tpm3P21107 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tpm3P21107 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Tpm3P21107 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tpm3P21107 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tpm3P21107 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tpm3P21107 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Tpm3P21107 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tpm3P21107 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tpm3P21107 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tpm3P21107 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Tpm3P21107 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tpm3P21107 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Tpm3P21107 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tpm3P21107 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC18.41■□□□□ 0.54
Tpm3P21107 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Tpm3P21107 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Tpm3P21107 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tpm3P21107 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tpm3P21107 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Tpm3P21107 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC18.4■□□□□ 0.54
Tpm3P21107 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tpm3P21107 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tpm3P21107 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tpm3P21107 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.4■□□□□ 0.54
Tpm3P21107 Gm11927-201ENSMUST00000118472 759 ntBASIC18.4■□□□□ 0.54
Tpm3P21107 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.4■□□□□ 0.54
Tpm3P21107 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tpm3P21107 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.4■□□□□ 0.54
Tpm3P21107 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Tpm3P21107 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tpm3P21107 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tpm3P21107 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tpm3P21107 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.4■□□□□ 0.54
Tpm3P21107 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tpm3P21107 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.39■□□□□ 0.54
Tpm3P21107 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Tpm3P21107 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Tpm3P21107 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Tpm3P21107 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tpm3P21107 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tpm3P21107 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Tpm3P21107 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tpm3P21107 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC18.39■□□□□ 0.53
Tpm3P21107 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.39■□□□□ 0.53
Tpm3P21107 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Tpm3P21107 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.39■□□□□ 0.53
Tpm3P21107 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Tpm3P21107 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tpm3P21107 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Tpm3P21107 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tpm3P21107 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Tpm3P21107 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.39■□□□□ 0.53
Tpm3P21107 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Tpm3P21107 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tpm3P21107 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tpm3P21107 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Tpm3P21107 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tpm3P21107 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tpm3P21107 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tpm3P21107 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tpm3P21107 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tpm3P21107 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tpm3P21107 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tpm3P21107 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tpm3P21107 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tpm3P21107 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tpm3P21107 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.38■□□□□ 0.53
Tpm3P21107 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tpm3P21107 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.38■□□□□ 0.53
Tpm3P21107 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tpm3P21107 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.38■□□□□ 0.53
Tpm3P21107 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Tpm3P21107 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tpm3P21107 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tpm3P21107 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
Tpm3P21107 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tpm3P21107 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tpm3P21107 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tpm3P21107 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tpm3P21107 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC18.38■□□□□ 0.53
Tpm3P21107 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tpm3P21107 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tpm3P21107 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Tpm3P21107 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms