Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hmgn1P18608 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgn1P18608 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgn1P18608 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Hmgn1P18608 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgn1P18608 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.01□□□□□ -0.01
Hmgn1P18608 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgn1P18608 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgn1P18608 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgn1P18608 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Hmgn1P18608 Gm12085-201ENSMUST00000119263 940 ntBASIC15.01□□□□□ -0.01
Hmgn1P18608 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Hmgn1P18608 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC15.01□□□□□ -0.01
Hmgn1P18608 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Hmgn1P18608 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgn1P18608 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgn1P18608 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.01□□□□□ -0.01
Hmgn1P18608 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgn1P18608 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgn1P18608 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgn1P18608 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.01□□□□□ -0.01
Hmgn1P18608 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Hmgn1P18608 Prob1-201ENSMUST00000097619 3021 ntBASIC15.01□□□□□ -0.01
Hmgn1P18608 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC15□□□□□ -0.01
Hmgn1P18608 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
Hmgn1P18608 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15□□□□□ -0.01
Hmgn1P18608 Gm6190-201ENSMUST00000220683 1374 ntBASIC15□□□□□ -0.01
Hmgn1P18608 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Hmgn1P18608 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Hmgn1P18608 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Hmgn1P18608 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hmgn1P18608 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hmgn1P18608 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hmgn1P18608 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15□□□□□ -0.01
Hmgn1P18608 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hmgn1P18608 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC15□□□□□ -0.01
Hmgn1P18608 Gm15378-201ENSMUST00000121894 207 ntBASIC15□□□□□ -0.01
Hmgn1P18608 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC15□□□□□ -0.01
Hmgn1P18608 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hmgn1P18608 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15□□□□□ -0.01
Hmgn1P18608 Actl10-202ENSMUST00000226583 1501 ntBASIC15□□□□□ -0.01
Hmgn1P18608 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Hmgn1P18608 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hmgn1P18608 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15□□□□□ -0.01
Hmgn1P18608 Gm42473-201ENSMUST00000201056 2291 ntBASIC15□□□□□ -0.01
Hmgn1P18608 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15□□□□□ -0.01
Hmgn1P18608 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hmgn1P18608 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15□□□□□ -0.01
Hmgn1P18608 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hmgn1P18608 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hmgn1P18608 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hmgn1P18608 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC14.99□□□□□ -0.01
Hmgn1P18608 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Hmgn1P18608 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Hmgn1P18608 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.99□□□□□ -0.01
Hmgn1P18608 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Hmgn1P18608 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hmgn1P18608 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.99□□□□□ -0.01
Hmgn1P18608 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hmgn1P18608 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hmgn1P18608 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hmgn1P18608 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
Hmgn1P18608 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hmgn1P18608 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Hmgn1P18608 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hmgn1P18608 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hmgn1P18608 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hmgn1P18608 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hmgn1P18608 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hmgn1P18608 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hmgn1P18608 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hmgn1P18608 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
Hmgn1P18608 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
Hmgn1P18608 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hmgn1P18608 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hmgn1P18608 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hmgn1P18608 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hmgn1P18608 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hmgn1P18608 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
Hmgn1P18608 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hmgn1P18608 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Hmgn1P18608 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hmgn1P18608 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Hmgn1P18608 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hmgn1P18608 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Hmgn1P18608 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hmgn1P18608 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hmgn1P18608 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hmgn1P18608 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Hmgn1P18608 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Hmgn1P18608 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.98□□□□□ -0.01
Hmgn1P18608 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Hmgn1P18608 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hmgn1P18608 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hmgn1P18608 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Hmgn1P18608 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hmgn1P18608 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Hmgn1P18608 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hmgn1P18608 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hmgn1P18608 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms