Protein–RNA interactions for Protein: P13705

Msh3, DNA mismatch repair protein Msh3, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3P13705 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Msh3P13705 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Msh3P13705 Gm7729-201ENSMUST00000050143 801 ntBASIC18.02■□□□□ 0.48
Msh3P13705 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Msh3P13705 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Msh3P13705 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.02■□□□□ 0.48
Msh3P13705 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Msh3P13705 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Msh3P13705 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC18.02■□□□□ 0.47
Msh3P13705 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Msh3P13705 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Msh3P13705 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Msh3P13705 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Msh3P13705 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Msh3P13705 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC18.01■□□□□ 0.47
Msh3P13705 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Msh3P13705 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Msh3P13705 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Msh3P13705 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Msh3P13705 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Msh3P13705 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Msh3P13705 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Msh3P13705 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Msh3P13705 Gm6623-201ENSMUST00000173570 544 ntBASIC18.01■□□□□ 0.47
Msh3P13705 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC18.01■□□□□ 0.47
Msh3P13705 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Msh3P13705 CT009713.7-201ENSMUST00000224689 571 ntBASIC18.01■□□□□ 0.47
Msh3P13705 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Msh3P13705 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Msh3P13705 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Msh3P13705 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Msh3P13705 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Msh3P13705 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Msh3P13705 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Msh3P13705 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Msh3P13705 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Msh3P13705 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Msh3P13705 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Msh3P13705 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Msh3P13705 AC069562.2-201ENSMUST00000224644 2146 ntBASIC18.01■□□□□ 0.47
Msh3P13705 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Msh3P13705 Gm6858-201ENSMUST00000208582 1468 ntBASIC18.01■□□□□ 0.47
Msh3P13705 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Msh3P13705 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Msh3P13705 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC18■□□□□ 0.47
Msh3P13705 AC132265.1-201ENSMUST00000219233 1665 ntBASIC18■□□□□ 0.47
Msh3P13705 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Msh3P13705 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Msh3P13705 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Msh3P13705 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Msh3P13705 Gm25016-201ENSMUST00000158399 131 ntBASIC18■□□□□ 0.47
Msh3P13705 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Msh3P13705 Gm17808-201ENSMUST00000200859 894 ntBASIC18■□□□□ 0.47
Msh3P13705 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC18■□□□□ 0.47
Msh3P13705 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Msh3P13705 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18■□□□□ 0.47
Msh3P13705 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Msh3P13705 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Msh3P13705 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Msh3P13705 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC18■□□□□ 0.47
Msh3P13705 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Msh3P13705 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC18■□□□□ 0.47
Msh3P13705 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18■□□□□ 0.47
Msh3P13705 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Msh3P13705 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Msh3P13705 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18■□□□□ 0.47
Msh3P13705 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Msh3P13705 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Msh3P13705 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18■□□□□ 0.47
Msh3P13705 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Msh3P13705 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.99■□□□□ 0.47
Msh3P13705 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Msh3P13705 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Msh3P13705 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Msh3P13705 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Msh3P13705 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Msh3P13705 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Msh3P13705 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.99■□□□□ 0.47
Msh3P13705 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.99■□□□□ 0.47
Msh3P13705 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Msh3P13705 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Msh3P13705 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Msh3P13705 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Msh3P13705 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Msh3P13705 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Msh3P13705 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Msh3P13705 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Msh3P13705 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.98■□□□□ 0.47
Msh3P13705 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Msh3P13705 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Msh3P13705 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Msh3P13705 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Msh3P13705 AA414768-201ENSMUST00000121924 1257 ntBASIC17.98■□□□□ 0.47
Msh3P13705 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
Msh3P13705 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Msh3P13705 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Msh3P13705 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Msh3P13705 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.98■□□□□ 0.47
Msh3P13705 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Msh3P13705 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms