Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RaraP11416 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.72■□□□□ 0.43
RaraP11416 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RaraP11416 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RaraP11416 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RaraP11416 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RaraP11416 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.72■□□□□ 0.43
RaraP11416 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.72■□□□□ 0.43
RaraP11416 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RaraP11416 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RaraP11416 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
RaraP11416 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RaraP11416 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.71■□□□□ 0.43
RaraP11416 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RaraP11416 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RaraP11416 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
RaraP11416 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
RaraP11416 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RaraP11416 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.71■□□□□ 0.43
RaraP11416 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
RaraP11416 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
RaraP11416 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RaraP11416 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RaraP11416 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RaraP11416 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RaraP11416 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
RaraP11416 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RaraP11416 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RaraP11416 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
RaraP11416 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
RaraP11416 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
RaraP11416 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.42
RaraP11416 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RaraP11416 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RaraP11416 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RaraP11416 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
RaraP11416 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RaraP11416 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RaraP11416 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RaraP11416 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RaraP11416 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RaraP11416 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RaraP11416 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RaraP11416 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RaraP11416 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RaraP11416 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RaraP11416 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RaraP11416 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RaraP11416 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RaraP11416 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RaraP11416 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RaraP11416 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RaraP11416 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RaraP11416 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RaraP11416 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.7■□□□□ 0.42
RaraP11416 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RaraP11416 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RaraP11416 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RaraP11416 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.69■□□□□ 0.42
RaraP11416 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RaraP11416 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RaraP11416 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RaraP11416 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RaraP11416 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RaraP11416 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RaraP11416 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RaraP11416 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RaraP11416 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.69■□□□□ 0.42
RaraP11416 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.69■□□□□ 0.42
RaraP11416 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
RaraP11416 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.69■□□□□ 0.42
RaraP11416 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.69■□□□□ 0.42
RaraP11416 Gm18421-201ENSMUST00000204122 625 ntBASIC17.69■□□□□ 0.42
RaraP11416 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.69■□□□□ 0.42
RaraP11416 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RaraP11416 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RaraP11416 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RaraP11416 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RaraP11416 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.69■□□□□ 0.42
RaraP11416 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RaraP11416 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RaraP11416 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
RaraP11416 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RaraP11416 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RaraP11416 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RaraP11416 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.68■□□□□ 0.42
RaraP11416 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RaraP11416 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RaraP11416 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RaraP11416 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RaraP11416 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RaraP11416 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.68■□□□□ 0.42
RaraP11416 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RaraP11416 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RaraP11416 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RaraP11416 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RaraP11416 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.68■□□□□ 0.42
RaraP11416 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RaraP11416 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RaraP11416 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms