Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.45□□□□□ -0.1
Ccl3P10855 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccl3P10855 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccl3P10855 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccl3P10855 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ccl3P10855 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccl3P10855 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccl3P10855 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccl3P10855 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccl3P10855 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccl3P10855 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccl3P10855 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccl3P10855 Gm7222-201ENSMUST00000117512 906 ntBASIC14.44□□□□□ -0.1
Ccl3P10855 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccl3P10855 Gm14494-201ENSMUST00000118786 435 ntBASIC14.44□□□□□ -0.1
Ccl3P10855 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccl3P10855 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccl3P10855 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.44□□□□□ -0.1
Ccl3P10855 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccl3P10855 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccl3P10855 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccl3P10855 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccl3P10855 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccl3P10855 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Ccl3P10855 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.44□□□□□ -0.1
Ccl3P10855 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccl3P10855 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccl3P10855 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccl3P10855 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Ccl3P10855 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccl3P10855 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ccl3P10855 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.43□□□□□ -0.1
Ccl3P10855 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccl3P10855 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Ccl3P10855 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccl3P10855 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccl3P10855 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccl3P10855 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccl3P10855 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Ccl3P10855 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.43□□□□□ -0.1
Ccl3P10855 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccl3P10855 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccl3P10855 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccl3P10855 Gm43575-201ENSMUST00000196420 516 ntBASIC14.43□□□□□ -0.1
Ccl3P10855 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccl3P10855 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccl3P10855 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ccl3P10855 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccl3P10855 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Ccl3P10855 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccl3P10855 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Ccl3P10855 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccl3P10855 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccl3P10855 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccl3P10855 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccl3P10855 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccl3P10855 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccl3P10855 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.42□□□□□ -0.1
Ccl3P10855 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC14.42□□□□□ -0.1
Ccl3P10855 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccl3P10855 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
Ccl3P10855 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ccl3P10855 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccl3P10855 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccl3P10855 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.42□□□□□ -0.1
Ccl3P10855 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Ccl3P10855 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.42□□□□□ -0.1
Ccl3P10855 Gm9727-201ENSMUST00000161387 555 ntBASIC14.42□□□□□ -0.1
Ccl3P10855 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ccl3P10855 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Ccl3P10855 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.42□□□□□ -0.1
Ccl3P10855 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.42□□□□□ -0.1
Ccl3P10855 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.42□□□□□ -0.1
Ccl3P10855 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccl3P10855 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ccl3P10855 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.42□□□□□ -0.1
Ccl3P10855 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccl3P10855 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccl3P10855 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccl3P10855 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccl3P10855 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.42□□□□□ -0.1
Ccl3P10855 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Ccl3P10855 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccl3P10855 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccl3P10855 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccl3P10855 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccl3P10855 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccl3P10855 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccl3P10855 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.42□□□□□ -0.1
Ccl3P10855 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccl3P10855 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccl3P10855 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccl3P10855 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccl3P10855 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccl3P10855 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccl3P10855 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccl3P10855 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccl3P10855 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccl3P10855 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccl3P10855 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms