Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Ly6c1P0CW02 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ly6c1P0CW02 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ly6c1P0CW02 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ly6c1P0CW02 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Ly6c1P0CW02 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ly6c1P0CW02 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ly6c1P0CW02 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ly6c1P0CW02 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC13.66□□□□□ -0.22
Ly6c1P0CW02 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ly6c1P0CW02 Mir3081-201ENSMUST00000175305 84 ntBASIC13.66□□□□□ -0.22
Ly6c1P0CW02 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.66□□□□□ -0.22
Ly6c1P0CW02 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC13.66□□□□□ -0.22
Ly6c1P0CW02 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ly6c1P0CW02 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ly6c1P0CW02 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ly6c1P0CW02 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ly6c1P0CW02 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ly6c1P0CW02 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Ly6c1P0CW02 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Ly6c1P0CW02 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ly6c1P0CW02 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ly6c1P0CW02 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ly6c1P0CW02 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ly6c1P0CW02 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ly6c1P0CW02 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ly6c1P0CW02 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ly6c1P0CW02 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ly6c1P0CW02 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ly6c1P0CW02 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ly6c1P0CW02 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ly6c1P0CW02 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ly6c1P0CW02 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Ly6c1P0CW02 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Ly6c1P0CW02 Gm9103-201ENSMUST00000119371 405 ntBASIC13.65□□□□□ -0.22
Ly6c1P0CW02 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ly6c1P0CW02 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ly6c1P0CW02 Gm44430-201ENSMUST00000203376 995 ntBASIC13.65□□□□□ -0.22
Ly6c1P0CW02 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC13.65□□□□□ -0.22
Ly6c1P0CW02 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ly6c1P0CW02 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ly6c1P0CW02 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ly6c1P0CW02 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ly6c1P0CW02 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ly6c1P0CW02 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ly6c1P0CW02 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ly6c1P0CW02 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ly6c1P0CW02 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ly6c1P0CW02 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ly6c1P0CW02 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Ly6c1P0CW02 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Ly6c1P0CW02 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.65□□□□□ -0.22
Ly6c1P0CW02 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ly6c1P0CW02 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ly6c1P0CW02 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC13.64□□□□□ -0.23
Ly6c1P0CW02 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC13.64□□□□□ -0.23
Ly6c1P0CW02 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ly6c1P0CW02 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ly6c1P0CW02 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Ly6c1P0CW02 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ly6c1P0CW02 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Ly6c1P0CW02 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ly6c1P0CW02 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ly6c1P0CW02 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ly6c1P0CW02 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.64□□□□□ -0.23
Ly6c1P0CW02 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ly6c1P0CW02 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Ly6c1P0CW02 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ly6c1P0CW02 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Ly6c1P0CW02 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC13.64□□□□□ -0.23
Ly6c1P0CW02 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC13.64□□□□□ -0.23
Ly6c1P0CW02 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ly6c1P0CW02 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Ly6c1P0CW02 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Ly6c1P0CW02 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ly6c1P0CW02 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ly6c1P0CW02 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ly6c1P0CW02 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ly6c1P0CW02 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ly6c1P0CW02 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Ly6c1P0CW02 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ly6c1P0CW02 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ly6c1P0CW02 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ly6c1P0CW02 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ly6c1P0CW02 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Ly6c1P0CW02 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ly6c1P0CW02 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ly6c1P0CW02 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Ly6c1P0CW02 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ly6c1P0CW02 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ly6c1P0CW02 Gm9889-202ENSMUST00000206983 1577 ntBASIC13.63□□□□□ -0.23
Ly6c1P0CW02 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ly6c1P0CW02 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ly6c1P0CW02 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC13.63□□□□□ -0.23
Ly6c1P0CW02 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC13.63□□□□□ -0.23
Ly6c1P0CW02 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ly6c1P0CW02 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ly6c1P0CW02 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ly6c1P0CW02 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Ly6c1P0CW02 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms