Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Chmp6P0C0A3 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Chmp6P0C0A3 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Chmp6P0C0A3 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Chmp6P0C0A3 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chmp6P0C0A3 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chmp6P0C0A3 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chmp6P0C0A3 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chmp6P0C0A3 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Chmp6P0C0A3 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chmp6P0C0A3 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chmp6P0C0A3 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chmp6P0C0A3 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chmp6P0C0A3 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chmp6P0C0A3 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Chmp6P0C0A3 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Chmp6P0C0A3 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp6P0C0A3 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp6P0C0A3 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp6P0C0A3 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp6P0C0A3 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp6P0C0A3 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp6P0C0A3 Gm13186-201ENSMUST00000118031 316 ntBASIC17.82■□□□□ 0.44
Chmp6P0C0A3 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp6P0C0A3 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp6P0C0A3 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp6P0C0A3 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.82■□□□□ 0.44
Chmp6P0C0A3 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp6P0C0A3 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp6P0C0A3 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp6P0C0A3 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp6P0C0A3 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp6P0C0A3 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Chmp6P0C0A3 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.81■□□□□ 0.44
Chmp6P0C0A3 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp6P0C0A3 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.81■□□□□ 0.44
Chmp6P0C0A3 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.81■□□□□ 0.44
Chmp6P0C0A3 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp6P0C0A3 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp6P0C0A3 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp6P0C0A3 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Chmp6P0C0A3 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Chmp6P0C0A3 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.81■□□□□ 0.44
Chmp6P0C0A3 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp6P0C0A3 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Chmp6P0C0A3 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp6P0C0A3 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp6P0C0A3 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp6P0C0A3 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp6P0C0A3 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp6P0C0A3 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.81■□□□□ 0.44
Chmp6P0C0A3 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Chmp6P0C0A3 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp6P0C0A3 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.81■□□□□ 0.44
Chmp6P0C0A3 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Chmp6P0C0A3 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp6P0C0A3 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp6P0C0A3 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Chmp6P0C0A3 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Chmp6P0C0A3 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp6P0C0A3 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp6P0C0A3 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp6P0C0A3 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp6P0C0A3 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp6P0C0A3 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.8■□□□□ 0.44
Chmp6P0C0A3 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Chmp6P0C0A3 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Chmp6P0C0A3 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Chmp6P0C0A3 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp6P0C0A3 Gm11336-201ENSMUST00000118168 334 ntBASIC17.8■□□□□ 0.44
Chmp6P0C0A3 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp6P0C0A3 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.8■□□□□ 0.44
Chmp6P0C0A3 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp6P0C0A3 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp6P0C0A3 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp6P0C0A3 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.8■□□□□ 0.44
Chmp6P0C0A3 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp6P0C0A3 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp6P0C0A3 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp6P0C0A3 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp6P0C0A3 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Chmp6P0C0A3 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp6P0C0A3 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp6P0C0A3 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp6P0C0A3 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp6P0C0A3 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp6P0C0A3 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp6P0C0A3 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Chmp6P0C0A3 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp6P0C0A3 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp6P0C0A3 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.79■□□□□ 0.44
Chmp6P0C0A3 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.79■□□□□ 0.44
Chmp6P0C0A3 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp6P0C0A3 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp6P0C0A3 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp6P0C0A3 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp6P0C0A3 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp6P0C0A3 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp6P0C0A3 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.79■□□□□ 0.44
Chmp6P0C0A3 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms