Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Gm27702-201ENSMUST00000184512 56 ntBASIC17.4■□□□□ 0.38
Hoxc8P09025 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxc8P09025 Gm2213-201ENSMUST00000197485 688 ntBASIC17.4■□□□□ 0.38
Hoxc8P09025 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC17.4■□□□□ 0.38
Hoxc8P09025 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Hoxc8P09025 Gm45683-201ENSMUST00000210825 1247 ntBASIC17.4■□□□□ 0.38
Hoxc8P09025 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxc8P09025 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxc8P09025 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC17.4■□□□□ 0.38
Hoxc8P09025 Gm10175-201ENSMUST00000086013 645 ntBASIC17.4■□□□□ 0.38
Hoxc8P09025 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxc8P09025 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxc8P09025 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxc8P09025 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Hoxc8P09025 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxc8P09025 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hoxc8P09025 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Hoxc8P09025 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hoxc8P09025 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hoxc8P09025 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.39■□□□□ 0.37
Hoxc8P09025 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.39■□□□□ 0.37
Hoxc8P09025 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.39■□□□□ 0.37
Hoxc8P09025 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.39■□□□□ 0.37
Hoxc8P09025 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.39■□□□□ 0.37
Hoxc8P09025 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.39■□□□□ 0.37
Hoxc8P09025 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17.39■□□□□ 0.37
Hoxc8P09025 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hoxc8P09025 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.39■□□□□ 0.37
Hoxc8P09025 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC17.39■□□□□ 0.37
Hoxc8P09025 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Hoxc8P09025 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC17.39■□□□□ 0.37
Hoxc8P09025 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.39■□□□□ 0.37
Hoxc8P09025 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.39■□□□□ 0.37
Hoxc8P09025 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.39■□□□□ 0.37
Hoxc8P09025 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC17.39■□□□□ 0.37
Hoxc8P09025 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.39■□□□□ 0.37
Hoxc8P09025 Gm8825-201ENSMUST00000182565 998 ntBASIC17.39■□□□□ 0.37
Hoxc8P09025 Gm4518-201ENSMUST00000182638 718 ntBASIC17.39■□□□□ 0.37
Hoxc8P09025 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.39■□□□□ 0.37
Hoxc8P09025 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.39■□□□□ 0.37
Hoxc8P09025 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.39■□□□□ 0.37
Hoxc8P09025 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hoxc8P09025 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.39■□□□□ 0.37
Hoxc8P09025 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC17.39■□□□□ 0.37
Hoxc8P09025 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hoxc8P09025 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Hoxc8P09025 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.39■□□□□ 0.37
Hoxc8P09025 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hoxc8P09025 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.39■□□□□ 0.37
Hoxc8P09025 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Hoxc8P09025 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hoxc8P09025 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.39■□□□□ 0.37
Hoxc8P09025 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hoxc8P09025 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hoxc8P09025 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hoxc8P09025 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hoxc8P09025 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Hoxc8P09025 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hoxc8P09025 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hoxc8P09025 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hoxc8P09025 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hoxc8P09025 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hoxc8P09025 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hoxc8P09025 Gm2308-201ENSMUST00000166539 1004 ntBASIC17.38■□□□□ 0.37
Hoxc8P09025 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC17.38■□□□□ 0.37
Hoxc8P09025 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC17.38■□□□□ 0.37
Hoxc8P09025 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC17.38■□□□□ 0.37
Hoxc8P09025 Gm2756-201ENSMUST00000195851 400 ntBASIC17.38■□□□□ 0.37
Hoxc8P09025 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
Hoxc8P09025 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hoxc8P09025 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hoxc8P09025 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hoxc8P09025 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hoxc8P09025 Rarb-207ENSMUST00000225921 2756 ntBASIC17.38■□□□□ 0.37
Hoxc8P09025 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
Hoxc8P09025 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Hoxc8P09025 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hoxc8P09025 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hoxc8P09025 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hoxc8P09025 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.37■□□□□ 0.37
Hoxc8P09025 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hoxc8P09025 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hoxc8P09025 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hoxc8P09025 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.37■□□□□ 0.37
Hoxc8P09025 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hoxc8P09025 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC17.37■□□□□ 0.37
Hoxc8P09025 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC17.37■□□□□ 0.37
Hoxc8P09025 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC17.37■□□□□ 0.37
Hoxc8P09025 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC17.37■□□□□ 0.37
Hoxc8P09025 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.37■□□□□ 0.37
Hoxc8P09025 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hoxc8P09025 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hoxc8P09025 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hoxc8P09025 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Hoxc8P09025 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.37■□□□□ 0.37
Hoxc8P09025 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hoxc8P09025 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hoxc8P09025 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hoxc8P09025 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hoxc8P09025 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms