Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sod1P08228 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Sod1P08228 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sod1P08228 Gm27702-201ENSMUST00000184512 56 ntBASIC15.34■□□□□ 0.05
Sod1P08228 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sod1P08228 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sod1P08228 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Sod1P08228 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sod1P08228 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sod1P08228 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sod1P08228 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sod1P08228 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sod1P08228 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sod1P08228 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sod1P08228 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sod1P08228 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sod1P08228 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sod1P08228 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.34■□□□□ 0.05
Sod1P08228 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sod1P08228 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sod1P08228 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sod1P08228 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sod1P08228 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sod1P08228 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sod1P08228 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sod1P08228 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.33■□□□□ 0.04
Sod1P08228 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC15.33■□□□□ 0.04
Sod1P08228 Gm27646-201ENSMUST00000183989 110 ntBASIC15.33■□□□□ 0.04
Sod1P08228 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.33■□□□□ 0.04
Sod1P08228 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sod1P08228 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sod1P08228 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sod1P08228 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sod1P08228 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sod1P08228 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sod1P08228 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sod1P08228 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.33■□□□□ 0.04
Sod1P08228 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sod1P08228 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sod1P08228 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sod1P08228 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sod1P08228 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Sod1P08228 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.32■□□□□ 0.04
Sod1P08228 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sod1P08228 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sod1P08228 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sod1P08228 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sod1P08228 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sod1P08228 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sod1P08228 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sod1P08228 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.32■□□□□ 0.04
Sod1P08228 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.32■□□□□ 0.04
Sod1P08228 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.32■□□□□ 0.04
Sod1P08228 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Sod1P08228 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sod1P08228 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sod1P08228 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sod1P08228 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sod1P08228 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sod1P08228 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sod1P08228 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Sod1P08228 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sod1P08228 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.31■□□□□ 0.04
Sod1P08228 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sod1P08228 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sod1P08228 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC15.31■□□□□ 0.04
Sod1P08228 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.31■□□□□ 0.04
Sod1P08228 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sod1P08228 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Sod1P08228 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC15.31■□□□□ 0.04
Sod1P08228 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC15.31■□□□□ 0.04
Sod1P08228 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sod1P08228 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.31■□□□□ 0.04
Sod1P08228 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC15.31■□□□□ 0.04
Sod1P08228 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.31■□□□□ 0.04
Sod1P08228 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sod1P08228 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sod1P08228 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sod1P08228 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sod1P08228 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sod1P08228 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sod1P08228 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sod1P08228 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sod1P08228 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sod1P08228 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sod1P08228 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sod1P08228 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.31■□□□□ 0.04
Sod1P08228 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Sod1P08228 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sod1P08228 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sod1P08228 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sod1P08228 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Sod1P08228 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Sod1P08228 Gm11764-201ENSMUST00000120221 623 ntBASIC15.3■□□□□ 0.04
Sod1P08228 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Sod1P08228 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sod1P08228 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sod1P08228 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.3■□□□□ 0.04
Sod1P08228 Gm5682-201ENSMUST00000173402 505 ntBASIC15.3■□□□□ 0.04
Sod1P08228 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms