Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.56■□□□□ 0.24
PdgfrbP05622 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PdgfrbP05622 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PdgfrbP05622 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PdgfrbP05622 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PdgfrbP05622 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PdgfrbP05622 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PdgfrbP05622 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PdgfrbP05622 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PdgfrbP05622 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PdgfrbP05622 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PdgfrbP05622 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PdgfrbP05622 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PdgfrbP05622 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PdgfrbP05622 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
PdgfrbP05622 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.55■□□□□ 0.24
PdgfrbP05622 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PdgfrbP05622 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PdgfrbP05622 Gm13836-201ENSMUST00000121159 501 ntBASIC16.55■□□□□ 0.24
PdgfrbP05622 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PdgfrbP05622 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.55■□□□□ 0.24
PdgfrbP05622 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PdgfrbP05622 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PdgfrbP05622 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PdgfrbP05622 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PdgfrbP05622 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.55■□□□□ 0.24
PdgfrbP05622 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PdgfrbP05622 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.55■□□□□ 0.24
PdgfrbP05622 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PdgfrbP05622 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PdgfrbP05622 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PdgfrbP05622 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PdgfrbP05622 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PdgfrbP05622 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PdgfrbP05622 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.54■□□□□ 0.24
PdgfrbP05622 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PdgfrbP05622 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PdgfrbP05622 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PdgfrbP05622 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PdgfrbP05622 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.54■□□□□ 0.24
PdgfrbP05622 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PdgfrbP05622 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PdgfrbP05622 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PdgfrbP05622 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PdgfrbP05622 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PdgfrbP05622 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PdgfrbP05622 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
PdgfrbP05622 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PdgfrbP05622 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PdgfrbP05622 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
PdgfrbP05622 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PdgfrbP05622 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PdgfrbP05622 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PdgfrbP05622 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.53■□□□□ 0.24
PdgfrbP05622 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PdgfrbP05622 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.53■□□□□ 0.24
PdgfrbP05622 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PdgfrbP05622 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PdgfrbP05622 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PdgfrbP05622 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PdgfrbP05622 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
PdgfrbP05622 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PdgfrbP05622 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PdgfrbP05622 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PdgfrbP05622 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PdgfrbP05622 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PdgfrbP05622 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PdgfrbP05622 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
PdgfrbP05622 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PdgfrbP05622 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
PdgfrbP05622 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PdgfrbP05622 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.52■□□□□ 0.24
PdgfrbP05622 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PdgfrbP05622 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
PdgfrbP05622 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
PdgfrbP05622 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PdgfrbP05622 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.52■□□□□ 0.24
PdgfrbP05622 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PdgfrbP05622 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
PdgfrbP05622 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
PdgfrbP05622 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PdgfrbP05622 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.52■□□□□ 0.24
PdgfrbP05622 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PdgfrbP05622 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.52■□□□□ 0.24
PdgfrbP05622 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
PdgfrbP05622 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
PdgfrbP05622 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PdgfrbP05622 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
PdgfrbP05622 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.52■□□□□ 0.24
PdgfrbP05622 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PdgfrbP05622 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.52■□□□□ 0.24
PdgfrbP05622 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PdgfrbP05622 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PdgfrbP05622 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
PdgfrbP05622 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PdgfrbP05622 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.52■□□□□ 0.24
PdgfrbP05622 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.52■□□□□ 0.23
PdgfrbP05622 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PdgfrbP05622 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PdgfrbP05622 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms