Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
P04224 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
P04224 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
P04224 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
P04224 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
P04224 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
P04224 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
P04224 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
P04224 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
P04224 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
P04224 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
P04224 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
P04224 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
P04224 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
P04224 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
P04224 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
P04224 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
P04224 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
P04224 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.42□□□□□ -0.1
P04224 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
P04224 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
P04224 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
P04224 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
P04224 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
P04224 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
P04224 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
P04224 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
P04224 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
P04224 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
P04224 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
P04224 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
P04224 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
P04224 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
P04224 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
P04224 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
P04224 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
P04224 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
P04224 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
P04224 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.41□□□□□ -0.1
P04224 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
P04224 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
P04224 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
P04224 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
P04224 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
P04224 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.41□□□□□ -0.1
P04224 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
P04224 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
P04224 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
P04224 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
P04224 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.41□□□□□ -0.1
P04224 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.41□□□□□ -0.1
P04224 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC14.41□□□□□ -0.1
P04224 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
P04224 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
P04224 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
P04224 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
P04224 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
P04224 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
P04224 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
P04224 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
P04224 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
P04224 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
P04224 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.4□□□□□ -0.1
P04224 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
P04224 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
P04224 Gm44672-201ENSMUST00000206944 1098 ntBASIC14.4□□□□□ -0.1
P04224 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC14.4□□□□□ -0.1
P04224 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
P04224 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
P04224 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
P04224 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
P04224 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
P04224 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
P04224 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
P04224 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
P04224 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
P04224 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
P04224 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
P04224 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
P04224 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
P04224 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
P04224 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.4□□□□□ -0.11
P04224 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
P04224 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
P04224 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
P04224 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
P04224 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
P04224 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC14.39□□□□□ -0.11
P04224 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
P04224 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
P04224 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
P04224 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
P04224 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC14.39□□□□□ -0.11
P04224 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
P04224 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
P04224 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
P04224 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
P04224 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
P04224 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
P04224 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms