Protein–RNA interactions for Protein: P04214

T-cell receptor beta chain V region E1, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04214 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
P04214 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.09■□□□□ 0.33
P04214 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC17.09■□□□□ 0.33
P04214 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
P04214 Gm2308-201ENSMUST00000166539 1004 ntBASIC17.09■□□□□ 0.33
P04214 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P04214 Gm45167-201ENSMUST00000208007 322 ntBASIC17.09■□□□□ 0.33
P04214 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P04214 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P04214 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
P04214 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P04214 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
P04214 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P04214 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
P04214 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
P04214 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
P04214 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
P04214 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
P04214 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
P04214 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
P04214 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
P04214 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P04214 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
P04214 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
P04214 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC17.08■□□□□ 0.32
P04214 Gm14701-201ENSMUST00000117156 348 ntBASIC17.08■□□□□ 0.32
P04214 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.08■□□□□ 0.32
P04214 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC17.08■□□□□ 0.32
P04214 Gm27300-201ENSMUST00000184085 97 ntBASIC17.08■□□□□ 0.32
P04214 Gm27335-201ENSMUST00000184758 97 ntBASIC17.08■□□□□ 0.32
P04214 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC17.08■□□□□ 0.32
P04214 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P04214 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P04214 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
P04214 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P04214 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.08■□□□□ 0.32
P04214 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P04214 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
P04214 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
P04214 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
P04214 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.07■□□□□ 0.32
P04214 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P04214 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC17.07■□□□□ 0.32
P04214 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P04214 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P04214 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P04214 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P04214 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
P04214 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.06■□□□□ 0.32
P04214 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04214 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04214 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
P04214 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04214 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
P04214 Gm11025-201ENSMUST00000140773 466 ntBASIC17.06■□□□□ 0.32
P04214 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
P04214 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
P04214 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04214 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC17.06■□□□□ 0.32
P04214 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC17.06■□□□□ 0.32
P04214 AC158982.1-201ENSMUST00000228377 901 ntBASIC17.06■□□□□ 0.32
P04214 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04214 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
P04214 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
P04214 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
P04214 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
P04214 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.06■□□□□ 0.32
P04214 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04214 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04214 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04214 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04214 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04214 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
P04214 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
P04214 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC17.05■□□□□ 0.32
P04214 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P04214 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P04214 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.05■□□□□ 0.32
P04214 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P04214 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P04214 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P04214 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.05■□□□□ 0.32
P04214 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
P04214 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
P04214 Gm14057-201ENSMUST00000120631 482 ntBASIC17.05■□□□□ 0.32
P04214 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC17.05■□□□□ 0.32
P04214 Gm4899-201ENSMUST00000178708 719 ntBASIC17.05■□□□□ 0.32
P04214 AC159295.1-201ENSMUST00000225326 940 ntBASIC17.05■□□□□ 0.32
P04214 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.05■□□□□ 0.32
P04214 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P04214 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P04214 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
P04214 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
P04214 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P04214 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
P04214 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P04214 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P04214 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P04214 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
P04214 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms