Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CfdP03953 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CfdP03953 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CfdP03953 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CfdP03953 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.72□□□□□ -0.21
CfdP03953 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CfdP03953 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
CfdP03953 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.71□□□□□ -0.21
CfdP03953 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CfdP03953 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CfdP03953 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CfdP03953 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CfdP03953 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CfdP03953 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CfdP03953 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC13.71□□□□□ -0.21
CfdP03953 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CfdP03953 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC13.71□□□□□ -0.21
CfdP03953 Gm5874-201ENSMUST00000096101 508 ntBASIC13.71□□□□□ -0.21
CfdP03953 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CfdP03953 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
CfdP03953 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
CfdP03953 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CfdP03953 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CfdP03953 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CfdP03953 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.71□□□□□ -0.21
CfdP03953 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CfdP03953 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CfdP03953 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CfdP03953 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CfdP03953 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
CfdP03953 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CfdP03953 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CfdP03953 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
CfdP03953 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CfdP03953 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CfdP03953 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CfdP03953 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CfdP03953 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.7□□□□□ -0.22
CfdP03953 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CfdP03953 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CfdP03953 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CfdP03953 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CfdP03953 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CfdP03953 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC13.7□□□□□ -0.22
CfdP03953 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CfdP03953 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CfdP03953 Gm26571-201ENSMUST00000181399 666 ntBASIC13.7□□□□□ -0.22
CfdP03953 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CfdP03953 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC13.7□□□□□ -0.22
CfdP03953 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC13.7□□□□□ -0.22
CfdP03953 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CfdP03953 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CfdP03953 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CfdP03953 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CfdP03953 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CfdP03953 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CfdP03953 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CfdP03953 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CfdP03953 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CfdP03953 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CfdP03953 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CfdP03953 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
CfdP03953 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CfdP03953 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CfdP03953 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CfdP03953 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CfdP03953 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CfdP03953 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CfdP03953 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CfdP03953 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CfdP03953 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CfdP03953 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CfdP03953 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
CfdP03953 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC13.69□□□□□ -0.22
CfdP03953 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CfdP03953 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.69□□□□□ -0.22
CfdP03953 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CfdP03953 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CfdP03953 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC13.69□□□□□ -0.22
CfdP03953 Gm9694-201ENSMUST00000193347 1189 ntBASIC13.69□□□□□ -0.22
CfdP03953 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CfdP03953 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
CfdP03953 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CfdP03953 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CfdP03953 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CfdP03953 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CfdP03953 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CfdP03953 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
CfdP03953 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CfdP03953 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CfdP03953 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CfdP03953 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CfdP03953 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CfdP03953 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CfdP03953 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CfdP03953 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CfdP03953 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CfdP03953 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CfdP03953 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CfdP03953 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms