Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC20.04■□□□□ 0.8
Col4a1P02463 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col4a1P02463 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC20.04■□□□□ 0.8
Col4a1P02463 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col4a1P02463 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col4a1P02463 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC20.04■□□□□ 0.8
Col4a1P02463 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col4a1P02463 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
Col4a1P02463 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col4a1P02463 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col4a1P02463 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col4a1P02463 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Col4a1P02463 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC20.03■□□□□ 0.8
Col4a1P02463 Gm44945-201ENSMUST00000206764 1187 ntBASIC20.03■□□□□ 0.8
Col4a1P02463 Gm7229-201ENSMUST00000214719 1007 ntBASIC20.03■□□□□ 0.8
Col4a1P02463 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Col4a1P02463 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col4a1P02463 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC20.03■□□□□ 0.8
Col4a1P02463 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col4a1P02463 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Col4a1P02463 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col4a1P02463 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col4a1P02463 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col4a1P02463 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Col4a1P02463 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC20.03■□□□□ 0.8
Col4a1P02463 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col4a1P02463 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col4a1P02463 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC20.03■□□□□ 0.8
Col4a1P02463 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC20.03■□□□□ 0.8
Col4a1P02463 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC20.03■□□□□ 0.8
Col4a1P02463 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.03■□□□□ 0.8
Col4a1P02463 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Col4a1P02463 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Col4a1P02463 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC20.03■□□□□ 0.8
Col4a1P02463 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Col4a1P02463 Gm8839-201ENSMUST00000121279 1645 ntBASIC20.03■□□□□ 0.8
Col4a1P02463 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col4a1P02463 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col4a1P02463 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Col4a1P02463 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col4a1P02463 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col4a1P02463 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col4a1P02463 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col4a1P02463 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC20.02■□□□□ 0.8
Col4a1P02463 AC154621.1-201ENSMUST00000226155 1119 ntBASIC20.02■□□□□ 0.8
Col4a1P02463 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col4a1P02463 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Col4a1P02463 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC20.02■□□□□ 0.79
Col4a1P02463 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col4a1P02463 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC20.01■□□□□ 0.79
Col4a1P02463 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col4a1P02463 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC20.01■□□□□ 0.79
Col4a1P02463 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col4a1P02463 Gm2308-201ENSMUST00000166539 1004 ntBASIC20.01■□□□□ 0.79
Col4a1P02463 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col4a1P02463 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col4a1P02463 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Col4a1P02463 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col4a1P02463 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col4a1P02463 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col4a1P02463 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC20.01■□□□□ 0.79
Col4a1P02463 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col4a1P02463 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Col4a1P02463 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Col4a1P02463 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC20.01■□□□□ 0.79
Col4a1P02463 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col4a1P02463 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col4a1P02463 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col4a1P02463 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC20■□□□□ 0.79
Col4a1P02463 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC20■□□□□ 0.79
Col4a1P02463 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col4a1P02463 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC20■□□□□ 0.79
Col4a1P02463 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC20■□□□□ 0.79
Col4a1P02463 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC20■□□□□ 0.79
Col4a1P02463 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC20■□□□□ 0.79
Col4a1P02463 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col4a1P02463 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col4a1P02463 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Col4a1P02463 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC20■□□□□ 0.79
Col4a1P02463 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC20■□□□□ 0.79
Col4a1P02463 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC20■□□□□ 0.79
Col4a1P02463 Bloc1s5-203ENSMUST00000224902 612 ntBASIC20■□□□□ 0.79
Col4a1P02463 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Col4a1P02463 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC20■□□□□ 0.79
Col4a1P02463 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC20■□□□□ 0.79
Col4a1P02463 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col4a1P02463 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col4a1P02463 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col4a1P02463 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col4a1P02463 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Col4a1P02463 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col4a1P02463 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col4a1P02463 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC19.99■□□□□ 0.79
Col4a1P02463 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Col4a1P02463 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col4a1P02463 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col4a1P02463 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Col4a1P02463 Gm5648-201ENSMUST00000122244 1587 ntBASIC19.98■□□□□ 0.79
Col4a1P02463 Gm13216-201ENSMUST00000117145 591 ntBASIC19.98■□□□□ 0.79
Col4a1P02463 Gm4899-201ENSMUST00000178708 719 ntBASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms