Protein–RNA interactions for Protein: P01878

Ig alpha chain C region, mousemouse

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01878 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.8■□□□□ 0.28
P01878 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
P01878 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.8■□□□□ 0.28
P01878 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
P01878 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
P01878 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
P01878 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
P01878 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P01878 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
P01878 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P01878 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P01878 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P01878 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.79■□□□□ 0.28
P01878 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
P01878 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
P01878 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.79■□□□□ 0.28
P01878 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
P01878 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P01878 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.79■□□□□ 0.28
P01878 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P01878 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P01878 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P01878 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P01878 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.79■□□□□ 0.28
P01878 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P01878 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P01878 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P01878 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P01878 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P01878 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.78■□□□□ 0.28
P01878 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P01878 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
P01878 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P01878 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
P01878 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P01878 Gm4995-201ENSMUST00000117247 432 ntBASIC16.78■□□□□ 0.28
P01878 Gm14140-201ENSMUST00000119999 995 ntBASIC16.78■□□□□ 0.28
P01878 Gm15467-201ENSMUST00000120582 445 ntBASIC16.78■□□□□ 0.28
P01878 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.78■□□□□ 0.28
P01878 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.78■□□□□ 0.28
P01878 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.78■□□□□ 0.28
P01878 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P01878 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
P01878 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
P01878 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P01878 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P01878 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.78■□□□□ 0.28
P01878 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.78■□□□□ 0.28
P01878 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
P01878 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
P01878 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
P01878 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.78■□□□□ 0.28
P01878 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
P01878 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
P01878 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
P01878 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P01878 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
P01878 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
P01878 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
P01878 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
P01878 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.77■□□□□ 0.28
P01878 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
P01878 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.77■□□□□ 0.28
P01878 Gm27646-201ENSMUST00000183989 110 ntBASIC16.77■□□□□ 0.28
P01878 Gm18622-201ENSMUST00000219361 595 ntBASIC16.77■□□□□ 0.28
P01878 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
P01878 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.77■□□□□ 0.28
P01878 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
P01878 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
P01878 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
P01878 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
P01878 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
P01878 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
P01878 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
P01878 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
P01878 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
P01878 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
P01878 Gm7222-201ENSMUST00000117512 906 ntBASIC16.76■□□□□ 0.27
P01878 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.76■□□□□ 0.27
P01878 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.76■□□□□ 0.27
P01878 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
P01878 Gm25925-201ENSMUST00000158314 306 ntBASIC16.76■□□□□ 0.27
P01878 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC16.76■□□□□ 0.27
P01878 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
P01878 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
P01878 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
P01878 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
P01878 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
P01878 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
P01878 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
P01878 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
P01878 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.75■□□□□ 0.27
P01878 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
P01878 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
P01878 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
P01878 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.75■□□□□ 0.27
P01878 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.75■□□□□ 0.27
P01878 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
P01878 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
P01878 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms