Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
P01788 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
P01788 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
P01788 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
P01788 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
P01788 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
P01788 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
P01788 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
P01788 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
P01788 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
P01788 Gm38027-201ENSMUST00000192315 235 ntBASIC12.97□□□□□ -0.33
P01788 AC135637.1-201ENSMUST00000227750 365 ntBASIC12.97□□□□□ -0.33
P01788 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
P01788 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
P01788 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
P01788 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
P01788 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
P01788 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
P01788 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
P01788 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
P01788 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
P01788 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
P01788 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
P01788 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
P01788 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
P01788 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC12.96□□□□□ -0.33
P01788 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
P01788 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
P01788 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
P01788 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
P01788 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
P01788 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
P01788 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
P01788 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
P01788 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
P01788 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
P01788 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
P01788 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
P01788 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
P01788 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
P01788 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
P01788 Gm18958-201ENSMUST00000174258 762 ntBASIC12.96□□□□□ -0.33
P01788 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC12.96□□□□□ -0.33
P01788 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC12.96□□□□□ -0.33
P01788 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
P01788 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
P01788 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
P01788 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
P01788 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
P01788 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
P01788 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
P01788 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
P01788 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
P01788 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
P01788 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
P01788 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
P01788 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
P01788 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
P01788 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC12.95□□□□□ -0.34
P01788 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
P01788 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
P01788 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
P01788 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
P01788 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
P01788 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
P01788 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
P01788 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
P01788 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
P01788 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
P01788 Il3ra-202ENSMUST00000223589 738 ntBASIC12.95□□□□□ -0.34
P01788 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
P01788 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC12.95□□□□□ -0.34
P01788 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
P01788 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC12.95□□□□□ -0.34
P01788 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
P01788 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
P01788 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
P01788 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
P01788 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
P01788 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
P01788 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC12.95□□□□□ -0.34
P01788 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
P01788 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
P01788 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC12.95□□□□□ -0.34
P01788 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
P01788 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
P01788 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
P01788 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01788 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01788 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01788 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01788 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01788 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01788 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
P01788 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
P01788 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
P01788 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01788 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC12.94□□□□□ -0.34
P01788 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC12.94□□□□□ -0.34
P01788 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms