Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CopeO89079 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.93■□□□□ 0.3
CopeO89079 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CopeO89079 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CopeO89079 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CopeO89079 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CopeO89079 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CopeO89079 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CopeO89079 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CopeO89079 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CopeO89079 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CopeO89079 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CopeO89079 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CopeO89079 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CopeO89079 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CopeO89079 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CopeO89079 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CopeO89079 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CopeO89079 Gm12527-201ENSMUST00000117967 564 ntBASIC16.92■□□□□ 0.3
CopeO89079 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CopeO89079 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.92■□□□□ 0.3
CopeO89079 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.92■□□□□ 0.3
CopeO89079 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.92■□□□□ 0.3
CopeO89079 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CopeO89079 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CopeO89079 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CopeO89079 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CopeO89079 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CopeO89079 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CopeO89079 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CopeO89079 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CopeO89079 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CopeO89079 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CopeO89079 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CopeO89079 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CopeO89079 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CopeO89079 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CopeO89079 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CopeO89079 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CopeO89079 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CopeO89079 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CopeO89079 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CopeO89079 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.91■□□□□ 0.3
CopeO89079 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CopeO89079 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.91■□□□□ 0.3
CopeO89079 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CopeO89079 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CopeO89079 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CopeO89079 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CopeO89079 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CopeO89079 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CopeO89079 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CopeO89079 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CopeO89079 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CopeO89079 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CopeO89079 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.9■□□□□ 0.3
CopeO89079 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CopeO89079 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CopeO89079 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CopeO89079 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CopeO89079 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CopeO89079 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CopeO89079 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CopeO89079 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CopeO89079 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC16.9■□□□□ 0.3
CopeO89079 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.9■□□□□ 0.3
CopeO89079 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CopeO89079 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.9■□□□□ 0.3
CopeO89079 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CopeO89079 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.9■□□□□ 0.3
CopeO89079 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CopeO89079 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CopeO89079 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.89■□□□□ 0.29
CopeO89079 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
CopeO89079 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CopeO89079 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CopeO89079 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.89■□□□□ 0.29
CopeO89079 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.89■□□□□ 0.29
CopeO89079 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CopeO89079 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CopeO89079 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CopeO89079 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.89■□□□□ 0.29
CopeO89079 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.89■□□□□ 0.29
CopeO89079 Gm7791-201ENSMUST00000219066 539 ntBASIC16.89■□□□□ 0.29
CopeO89079 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CopeO89079 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CopeO89079 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CopeO89079 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CopeO89079 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CopeO89079 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CopeO89079 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CopeO89079 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CopeO89079 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CopeO89079 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CopeO89079 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CopeO89079 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CopeO89079 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CopeO89079 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CopeO89079 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
CopeO89079 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms