Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Abcd4O89016 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Abcd4O89016 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Abcd4O89016 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Abcd4O89016 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Abcd4O89016 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Abcd4O89016 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Abcd4O89016 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Abcd4O89016 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.81□□□□□ -0.04
Abcd4O89016 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.81□□□□□ -0.04
Abcd4O89016 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Abcd4O89016 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Abcd4O89016 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Abcd4O89016 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Abcd4O89016 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Abcd4O89016 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Abcd4O89016 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Abcd4O89016 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.8□□□□□ -0.04
Abcd4O89016 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Abcd4O89016 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Abcd4O89016 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Abcd4O89016 Gm13216-201ENSMUST00000117145 591 ntBASIC14.8□□□□□ -0.04
Abcd4O89016 Gm11336-201ENSMUST00000118168 334 ntBASIC14.8□□□□□ -0.04
Abcd4O89016 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Abcd4O89016 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Abcd4O89016 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.8□□□□□ -0.04
Abcd4O89016 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.8□□□□□ -0.04
Abcd4O89016 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.8□□□□□ -0.04
Abcd4O89016 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Abcd4O89016 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Abcd4O89016 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Abcd4O89016 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Abcd4O89016 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Abcd4O89016 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Abcd4O89016 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Abcd4O89016 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Abcd4O89016 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Abcd4O89016 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Abcd4O89016 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Abcd4O89016 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.8□□□□□ -0.04
Abcd4O89016 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Abcd4O89016 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Abcd4O89016 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Abcd4O89016 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Abcd4O89016 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Abcd4O89016 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.79□□□□□ -0.04
Abcd4O89016 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Abcd4O89016 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Abcd4O89016 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Abcd4O89016 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Abcd4O89016 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Abcd4O89016 Gm7153-201ENSMUST00000117092 455 ntBASIC14.79□□□□□ -0.04
Abcd4O89016 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Abcd4O89016 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Abcd4O89016 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Abcd4O89016 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Abcd4O89016 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Abcd4O89016 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Abcd4O89016 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Abcd4O89016 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.79□□□□□ -0.04
Abcd4O89016 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Abcd4O89016 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Abcd4O89016 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Abcd4O89016 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Abcd4O89016 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Abcd4O89016 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Abcd4O89016 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Abcd4O89016 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Abcd4O89016 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Abcd4O89016 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Abcd4O89016 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Abcd4O89016 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Abcd4O89016 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Abcd4O89016 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Abcd4O89016 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Abcd4O89016 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Abcd4O89016 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Abcd4O89016 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Abcd4O89016 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Abcd4O89016 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Abcd4O89016 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Abcd4O89016 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Abcd4O89016 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Abcd4O89016 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Abcd4O89016 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Abcd4O89016 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Abcd4O89016 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Abcd4O89016 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Abcd4O89016 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Abcd4O89016 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Abcd4O89016 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.78□□□□□ -0.04
Abcd4O89016 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Abcd4O89016 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Abcd4O89016 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.78□□□□□ -0.04
Abcd4O89016 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Abcd4O89016 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Abcd4O89016 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Abcd4O89016 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Abcd4O89016 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Abcd4O89016 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms