Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Syn1O88935 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Syn1O88935 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Syn1O88935 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.83■□□□□ 0.28
Syn1O88935 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Syn1O88935 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Syn1O88935 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Syn1O88935 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.82■□□□□ 0.28
Syn1O88935 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Syn1O88935 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.82■□□□□ 0.28
Syn1O88935 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Syn1O88935 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Syn1O88935 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Syn1O88935 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC16.82■□□□□ 0.28
Syn1O88935 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Syn1O88935 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Syn1O88935 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Syn1O88935 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Syn1O88935 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Syn1O88935 Gm37171-201ENSMUST00000192636 1185 ntBASIC16.82■□□□□ 0.28
Syn1O88935 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Syn1O88935 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Syn1O88935 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC16.82■□□□□ 0.28
Syn1O88935 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Syn1O88935 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Syn1O88935 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Syn1O88935 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Syn1O88935 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Syn1O88935 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Syn1O88935 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Syn1O88935 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.81■□□□□ 0.28
Syn1O88935 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Syn1O88935 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Syn1O88935 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Syn1O88935 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Syn1O88935 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Syn1O88935 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC16.81■□□□□ 0.28
Syn1O88935 AA543401-201ENSMUST00000164248 1269 ntBASIC16.81■□□□□ 0.28
Syn1O88935 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.81■□□□□ 0.28
Syn1O88935 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Syn1O88935 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Syn1O88935 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Syn1O88935 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Syn1O88935 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.81■□□□□ 0.28
Syn1O88935 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Syn1O88935 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Syn1O88935 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Syn1O88935 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Syn1O88935 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Syn1O88935 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Syn1O88935 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Syn1O88935 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Syn1O88935 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Syn1O88935 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Syn1O88935 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.8■□□□□ 0.28
Syn1O88935 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Syn1O88935 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.8■□□□□ 0.28
Syn1O88935 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Syn1O88935 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Syn1O88935 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Syn1O88935 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Syn1O88935 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Syn1O88935 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Syn1O88935 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Syn1O88935 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Syn1O88935 Rarb-207ENSMUST00000225921 2756 ntBASIC16.8■□□□□ 0.28
Syn1O88935 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.8■□□□□ 0.28
Syn1O88935 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.8■□□□□ 0.28
Syn1O88935 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Syn1O88935 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Syn1O88935 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Syn1O88935 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.8■□□□□ 0.28
Syn1O88935 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Syn1O88935 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Syn1O88935 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Syn1O88935 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Syn1O88935 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Syn1O88935 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Syn1O88935 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Syn1O88935 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Syn1O88935 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Syn1O88935 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Syn1O88935 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Syn1O88935 Gm17271-201ENSMUST00000165535 355 ntBASIC16.79■□□□□ 0.28
Syn1O88935 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Syn1O88935 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Syn1O88935 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC16.79■□□□□ 0.28
Syn1O88935 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Syn1O88935 Gm8396-201ENSMUST00000057361 823 ntBASIC16.79■□□□□ 0.28
Syn1O88935 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.79■□□□□ 0.28
Syn1O88935 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Syn1O88935 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Syn1O88935 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Syn1O88935 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Syn1O88935 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.79■□□□□ 0.28
Syn1O88935 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Syn1O88935 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.79■□□□□ 0.28
Syn1O88935 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Syn1O88935 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Syn1O88935 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms