Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hdac3O88895 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hdac3O88895 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Hdac3O88895 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hdac3O88895 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hdac3O88895 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Hdac3O88895 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hdac3O88895 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hdac3O88895 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hdac3O88895 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hdac3O88895 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hdac3O88895 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
Hdac3O88895 Prob1-201ENSMUST00000097619 3021 ntBASIC14.66□□□□□ -0.06
Hdac3O88895 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hdac3O88895 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hdac3O88895 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Hdac3O88895 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.65□□□□□ -0.06
Hdac3O88895 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Hdac3O88895 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hdac3O88895 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hdac3O88895 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Hdac3O88895 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hdac3O88895 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.65□□□□□ -0.06
Hdac3O88895 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.65□□□□□ -0.06
Hdac3O88895 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hdac3O88895 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hdac3O88895 Gm2274-201ENSMUST00000184539 609 ntBASIC14.65□□□□□ -0.06
Hdac3O88895 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Hdac3O88895 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Hdac3O88895 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hdac3O88895 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.65□□□□□ -0.06
Hdac3O88895 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hdac3O88895 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Hdac3O88895 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hdac3O88895 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hdac3O88895 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Hdac3O88895 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Hdac3O88895 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hdac3O88895 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hdac3O88895 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hdac3O88895 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hdac3O88895 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.64□□□□□ -0.07
Hdac3O88895 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.64□□□□□ -0.07
Hdac3O88895 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hdac3O88895 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hdac3O88895 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Hdac3O88895 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hdac3O88895 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hdac3O88895 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Hdac3O88895 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hdac3O88895 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hdac3O88895 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hdac3O88895 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Hdac3O88895 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.64□□□□□ -0.07
Hdac3O88895 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.64□□□□□ -0.07
Hdac3O88895 Gm13474-201ENSMUST00000122466 815 ntBASIC14.64□□□□□ -0.07
Hdac3O88895 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hdac3O88895 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Hdac3O88895 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Hdac3O88895 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hdac3O88895 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Hdac3O88895 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.64□□□□□ -0.07
Hdac3O88895 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hdac3O88895 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Hdac3O88895 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hdac3O88895 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Hdac3O88895 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Hdac3O88895 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Hdac3O88895 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hdac3O88895 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hdac3O88895 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hdac3O88895 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hdac3O88895 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Hdac3O88895 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Hdac3O88895 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hdac3O88895 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Hdac3O88895 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hdac3O88895 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Hdac3O88895 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Hdac3O88895 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Hdac3O88895 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC14.63□□□□□ -0.07
Hdac3O88895 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.63□□□□□ -0.07
Hdac3O88895 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.63□□□□□ -0.07
Hdac3O88895 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.63□□□□□ -0.07
Hdac3O88895 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.63□□□□□ -0.07
Hdac3O88895 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.63□□□□□ -0.07
Hdac3O88895 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hdac3O88895 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Hdac3O88895 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hdac3O88895 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Hdac3O88895 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hdac3O88895 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hdac3O88895 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Hdac3O88895 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hdac3O88895 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hdac3O88895 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hdac3O88895 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hdac3O88895 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Hdac3O88895 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Hdac3O88895 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms