Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Hcn1O88704 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Hcn1O88704 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hcn1O88704 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hcn1O88704 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hcn1O88704 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Hcn1O88704 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hcn1O88704 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Hcn1O88704 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Hcn1O88704 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hcn1O88704 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hcn1O88704 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Hcn1O88704 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hcn1O88704 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hcn1O88704 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hcn1O88704 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Hcn1O88704 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.69■□□□□ 0.1
Hcn1O88704 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hcn1O88704 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hcn1O88704 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hcn1O88704 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hcn1O88704 Gm18958-201ENSMUST00000174258 762 ntBASIC15.69■□□□□ 0.1
Hcn1O88704 AC134329.2-201ENSMUST00000217897 428 ntBASIC15.69■□□□□ 0.1
Hcn1O88704 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hcn1O88704 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Hcn1O88704 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hcn1O88704 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hcn1O88704 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hcn1O88704 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hcn1O88704 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hcn1O88704 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hcn1O88704 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hcn1O88704 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hcn1O88704 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Hcn1O88704 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hcn1O88704 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hcn1O88704 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hcn1O88704 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hcn1O88704 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hcn1O88704 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hcn1O88704 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hcn1O88704 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Hcn1O88704 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
Hcn1O88704 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.68■□□□□ 0.1
Hcn1O88704 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.68■□□□□ 0.1
Hcn1O88704 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hcn1O88704 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hcn1O88704 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hcn1O88704 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hcn1O88704 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hcn1O88704 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hcn1O88704 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hcn1O88704 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hcn1O88704 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hcn1O88704 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hcn1O88704 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hcn1O88704 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.68■□□□□ 0.1
Hcn1O88704 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hcn1O88704 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hcn1O88704 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.67■□□□□ 0.1
Hcn1O88704 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.67■□□□□ 0.1
Hcn1O88704 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Hcn1O88704 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hcn1O88704 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hcn1O88704 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.67■□□□□ 0.1
Hcn1O88704 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Hcn1O88704 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hcn1O88704 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hcn1O88704 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hcn1O88704 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hcn1O88704 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hcn1O88704 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hcn1O88704 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hcn1O88704 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hcn1O88704 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Hcn1O88704 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hcn1O88704 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hcn1O88704 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Hcn1O88704 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hcn1O88704 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.66■□□□□ 0.1
Hcn1O88704 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hcn1O88704 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hcn1O88704 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hcn1O88704 Gm10013-201ENSMUST00000106074 672 ntBASIC15.66■□□□□ 0.1
Hcn1O88704 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hcn1O88704 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hcn1O88704 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hcn1O88704 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hcn1O88704 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Hcn1O88704 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hcn1O88704 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hcn1O88704 Gm18101-201ENSMUST00000215769 548 ntBASIC15.66■□□□□ 0.1
Hcn1O88704 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hcn1O88704 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hcn1O88704 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hcn1O88704 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hcn1O88704 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hcn1O88704 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hcn1O88704 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hcn1O88704 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms