Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cops6O88545 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cops6O88545 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Cops6O88545 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cops6O88545 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cops6O88545 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cops6O88545 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cops6O88545 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC19.94■□□□□ 0.78
Cops6O88545 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cops6O88545 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cops6O88545 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cops6O88545 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Cops6O88545 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cops6O88545 Gm8097-201ENSMUST00000117903 829 ntBASIC19.94■□□□□ 0.78
Cops6O88545 Gm25406-201ENSMUST00000157599 105 ntBASIC19.94■□□□□ 0.78
Cops6O88545 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC19.94■□□□□ 0.78
Cops6O88545 Mir5126-201ENSMUST00000175513 77 ntBASIC19.94■□□□□ 0.78
Cops6O88545 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC19.94■□□□□ 0.78
Cops6O88545 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC19.94■□□□□ 0.78
Cops6O88545 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC19.94■□□□□ 0.78
Cops6O88545 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Cops6O88545 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.94■□□□□ 0.78
Cops6O88545 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cops6O88545 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cops6O88545 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Cops6O88545 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cops6O88545 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cops6O88545 Gm6858-201ENSMUST00000208582 1468 ntBASIC19.93■□□□□ 0.78
Cops6O88545 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cops6O88545 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cops6O88545 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cops6O88545 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Cops6O88545 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cops6O88545 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cops6O88545 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cops6O88545 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC19.93■□□□□ 0.78
Cops6O88545 Gm7230-201ENSMUST00000173026 815 ntBASIC19.93■□□□□ 0.78
Cops6O88545 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cops6O88545 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cops6O88545 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cops6O88545 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cops6O88545 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cops6O88545 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cops6O88545 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Cops6O88545 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cops6O88545 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cops6O88545 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cops6O88545 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC19.92■□□□□ 0.78
Cops6O88545 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cops6O88545 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cops6O88545 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cops6O88545 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cops6O88545 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Cops6O88545 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC19.92■□□□□ 0.78
Cops6O88545 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cops6O88545 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC19.92■□□□□ 0.78
Cops6O88545 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cops6O88545 Gm9172-201ENSMUST00000212092 954 ntBASIC19.92■□□□□ 0.78
Cops6O88545 Gm8655-201ENSMUST00000221159 852 ntBASIC19.92■□□□□ 0.78
Cops6O88545 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC19.92■□□□□ 0.78
Cops6O88545 Gm5867-201ENSMUST00000063197 592 ntBASIC19.92■□□□□ 0.78
Cops6O88545 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Cops6O88545 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cops6O88545 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cops6O88545 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cops6O88545 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cops6O88545 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Cops6O88545 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cops6O88545 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cops6O88545 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cops6O88545 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Cops6O88545 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Cops6O88545 Gm36858-201ENSMUST00000194501 2391 ntBASIC19.91■□□□□ 0.78
Cops6O88545 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cops6O88545 Gm11780-201ENSMUST00000136880 516 ntBASIC19.91■□□□□ 0.78
Cops6O88545 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC19.91■□□□□ 0.78
Cops6O88545 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC19.91■□□□□ 0.78
Cops6O88545 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC19.91■□□□□ 0.78
Cops6O88545 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cops6O88545 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cops6O88545 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cops6O88545 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC19.91■□□□□ 0.78
Cops6O88545 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cops6O88545 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
Cops6O88545 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.91■□□□□ 0.78
Cops6O88545 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19.91■□□□□ 0.78
Cops6O88545 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Cops6O88545 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cops6O88545 AC154527.4-201ENSMUST00000224364 1667 ntBASIC19.91■□□□□ 0.78
Cops6O88545 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cops6O88545 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cops6O88545 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cops6O88545 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
Cops6O88545 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Cops6O88545 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cops6O88545 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC19.9■□□□□ 0.78
Cops6O88545 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cops6O88545 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Cops6O88545 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cops6O88545 Gm15173-201ENSMUST00000122049 433 ntBASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms