Protein–RNA interactions for Protein: O88413

Tulp3, Tubby-related protein 3, mousemouse

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tulp3O88413 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tulp3O88413 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tulp3O88413 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Tulp3O88413 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC15.31■□□□□ 0.04
Tulp3O88413 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tulp3O88413 Il3ra-202ENSMUST00000223589 738 ntBASIC15.31■□□□□ 0.04
Tulp3O88413 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tulp3O88413 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tulp3O88413 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tulp3O88413 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Tulp3O88413 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tulp3O88413 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tulp3O88413 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tulp3O88413 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tulp3O88413 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.31■□□□□ 0.04
Tulp3O88413 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tulp3O88413 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tulp3O88413 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tulp3O88413 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tulp3O88413 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.3■□□□□ 0.04
Tulp3O88413 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tulp3O88413 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Tulp3O88413 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tulp3O88413 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tulp3O88413 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tulp3O88413 Gm7638-201ENSMUST00000121348 967 ntBASIC15.3■□□□□ 0.04
Tulp3O88413 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Tulp3O88413 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tulp3O88413 Gm5297-201ENSMUST00000198555 1171 ntBASIC15.3■□□□□ 0.04
Tulp3O88413 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Tulp3O88413 Gm20049-201ENSMUST00000219950 730 ntBASIC15.3■□□□□ 0.04
Tulp3O88413 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.3■□□□□ 0.04
Tulp3O88413 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tulp3O88413 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Tulp3O88413 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tulp3O88413 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tulp3O88413 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tulp3O88413 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tulp3O88413 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tulp3O88413 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tulp3O88413 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Tulp3O88413 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tulp3O88413 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tulp3O88413 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.29■□□□□ 0.04
Tulp3O88413 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Tulp3O88413 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Tulp3O88413 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tulp3O88413 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.29■□□□□ 0.04
Tulp3O88413 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tulp3O88413 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tulp3O88413 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tulp3O88413 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Tulp3O88413 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tulp3O88413 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Tulp3O88413 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tulp3O88413 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Tulp3O88413 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tulp3O88413 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tulp3O88413 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Tulp3O88413 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.29■□□□□ 0.04
Tulp3O88413 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Tulp3O88413 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Tulp3O88413 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tulp3O88413 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.28■□□□□ 0.04
Tulp3O88413 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tulp3O88413 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tulp3O88413 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tulp3O88413 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tulp3O88413 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.28■□□□□ 0.04
Tulp3O88413 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tulp3O88413 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tulp3O88413 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tulp3O88413 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Tulp3O88413 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tulp3O88413 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tulp3O88413 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC15.28■□□□□ 0.04
Tulp3O88413 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Tulp3O88413 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC15.28■□□□□ 0.04
Tulp3O88413 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.28■□□□□ 0.04
Tulp3O88413 AC164629.5-201ENSMUST00000220387 632 ntBASIC15.28■□□□□ 0.04
Tulp3O88413 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tulp3O88413 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tulp3O88413 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tulp3O88413 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tulp3O88413 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tulp3O88413 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.28■□□□□ 0.04
Tulp3O88413 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Tulp3O88413 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tulp3O88413 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tulp3O88413 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tulp3O88413 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tulp3O88413 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Tulp3O88413 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Tulp3O88413 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tulp3O88413 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tulp3O88413 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tulp3O88413 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tulp3O88413 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Tulp3O88413 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.27■□□□□ 0.04
Tulp3O88413 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms