Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Tgfbr3O88393 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.53■□□□□ 0.08
Tgfbr3O88393 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Tgfbr3O88393 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.53■□□□□ 0.08
Tgfbr3O88393 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
Tgfbr3O88393 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tgfbr3O88393 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tgfbr3O88393 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Tgfbr3O88393 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Tgfbr3O88393 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC15.53■□□□□ 0.08
Tgfbr3O88393 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Tgfbr3O88393 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tgfbr3O88393 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Tgfbr3O88393 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tgfbr3O88393 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tgfbr3O88393 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Tgfbr3O88393 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tgfbr3O88393 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.52■□□□□ 0.08
Tgfbr3O88393 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tgfbr3O88393 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Tgfbr3O88393 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.52■□□□□ 0.08
Tgfbr3O88393 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tgfbr3O88393 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tgfbr3O88393 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
Tgfbr3O88393 Gm12497-201ENSMUST00000138778 237 ntBASIC15.52■□□□□ 0.08
Tgfbr3O88393 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Tgfbr3O88393 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Tgfbr3O88393 Gm6089-201ENSMUST00000197666 938 ntBASIC15.52■□□□□ 0.08
Tgfbr3O88393 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.52■□□□□ 0.08
Tgfbr3O88393 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tgfbr3O88393 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Tgfbr3O88393 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Tgfbr3O88393 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Tgfbr3O88393 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
Tgfbr3O88393 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
Tgfbr3O88393 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Tgfbr3O88393 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.52■□□□□ 0.07
Tgfbr3O88393 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Tgfbr3O88393 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Tgfbr3O88393 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tgfbr3O88393 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tgfbr3O88393 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tgfbr3O88393 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tgfbr3O88393 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tgfbr3O88393 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tgfbr3O88393 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tgfbr3O88393 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tgfbr3O88393 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tgfbr3O88393 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tgfbr3O88393 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tgfbr3O88393 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tgfbr3O88393 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tgfbr3O88393 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.51■□□□□ 0.07
Tgfbr3O88393 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.51■□□□□ 0.07
Tgfbr3O88393 Gm6550-201ENSMUST00000187574 993 ntBASIC15.51■□□□□ 0.07
Tgfbr3O88393 AV026068-213ENSMUST00000223675 1171 ntBASIC15.51■□□□□ 0.07
Tgfbr3O88393 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.51■□□□□ 0.07
Tgfbr3O88393 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.51■□□□□ 0.07
Tgfbr3O88393 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tgfbr3O88393 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tgfbr3O88393 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tgfbr3O88393 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Tgfbr3O88393 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tgfbr3O88393 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Tgfbr3O88393 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Tgfbr3O88393 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Tgfbr3O88393 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
Tgfbr3O88393 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
Tgfbr3O88393 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tgfbr3O88393 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tgfbr3O88393 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tgfbr3O88393 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Tgfbr3O88393 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tgfbr3O88393 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Tgfbr3O88393 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tgfbr3O88393 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tgfbr3O88393 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Tgfbr3O88393 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Tgfbr3O88393 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.5■□□□□ 0.07
Tgfbr3O88393 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.5■□□□□ 0.07
Tgfbr3O88393 Gm12260-201ENSMUST00000122447 411 ntBASIC15.5■□□□□ 0.07
Tgfbr3O88393 Gm11780-201ENSMUST00000136880 516 ntBASIC15.5■□□□□ 0.07
Tgfbr3O88393 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.5■□□□□ 0.07
Tgfbr3O88393 Gm27702-201ENSMUST00000184512 56 ntBASIC15.5■□□□□ 0.07
Tgfbr3O88393 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tgfbr3O88393 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.5■□□□□ 0.07
Tgfbr3O88393 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Tgfbr3O88393 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tgfbr3O88393 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tgfbr3O88393 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tgfbr3O88393 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tgfbr3O88393 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tgfbr3O88393 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Tgfbr3O88393 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Tgfbr3O88393 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Tgfbr3O88393 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Tgfbr3O88393 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tgfbr3O88393 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tgfbr3O88393 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tgfbr3O88393 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms