Protein–RNA interactions for Protein: O88322

Nid2, Nidogen-2, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid2O88322 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Nid2O88322 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
Nid2O88322 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nid2O88322 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Nid2O88322 Gm11025-201ENSMUST00000140773 466 ntBASIC21.21■□□□□ 0.99
Nid2O88322 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nid2O88322 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nid2O88322 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nid2O88322 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nid2O88322 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nid2O88322 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nid2O88322 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nid2O88322 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
Nid2O88322 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nid2O88322 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nid2O88322 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC21.2■□□□□ 0.98
Nid2O88322 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nid2O88322 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC21.2■□□□□ 0.98
Nid2O88322 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nid2O88322 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC21.2■□□□□ 0.98
Nid2O88322 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nid2O88322 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Nid2O88322 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Nid2O88322 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nid2O88322 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC21.19■□□□□ 0.98
Nid2O88322 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Nid2O88322 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nid2O88322 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nid2O88322 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nid2O88322 Gm13597-201ENSMUST00000121239 375 ntBASIC21.19■□□□□ 0.98
Nid2O88322 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nid2O88322 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nid2O88322 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC21.19■□□□□ 0.98
Nid2O88322 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nid2O88322 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nid2O88322 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
Nid2O88322 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Nid2O88322 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nid2O88322 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Nid2O88322 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Nid2O88322 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nid2O88322 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nid2O88322 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nid2O88322 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nid2O88322 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC21.18■□□□□ 0.98
Nid2O88322 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nid2O88322 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Nid2O88322 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC21.18■□□□□ 0.98
Nid2O88322 Gm4609-201ENSMUST00000106443 1002 ntBASIC21.18■□□□□ 0.98
Nid2O88322 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC21.18■□□□□ 0.98
Nid2O88322 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC21.18■□□□□ 0.98
Nid2O88322 Gm5138-201ENSMUST00000113842 1002 ntBASIC21.18■□□□□ 0.98
Nid2O88322 Gm15191-201ENSMUST00000117933 1000 ntBASIC21.18■□□□□ 0.98
Nid2O88322 Gm12182-201ENSMUST00000118655 1008 ntBASIC21.18■□□□□ 0.98
Nid2O88322 Gm13882-201ENSMUST00000120886 1002 ntBASIC21.18■□□□□ 0.98
Nid2O88322 Gm10284-201ENSMUST00000145057 1005 ntBASIC21.18■□□□□ 0.98
Nid2O88322 Gm10481-201ENSMUST00000179228 1002 ntBASIC21.18■□□□□ 0.98
Nid2O88322 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC21.18■□□□□ 0.98
Nid2O88322 Gm2574-201ENSMUST00000181051 1002 ntBASIC21.18■□□□□ 0.98
Nid2O88322 Gm3200-201ENSMUST00000181493 1002 ntBASIC21.18■□□□□ 0.98
Nid2O88322 Gm8825-201ENSMUST00000182565 998 ntBASIC21.18■□□□□ 0.98
Nid2O88322 Gm4518-201ENSMUST00000182638 718 ntBASIC21.18■□□□□ 0.98
Nid2O88322 Gm8330-201ENSMUST00000182754 1008 ntBASIC21.18■□□□□ 0.98
Nid2O88322 Gm4575-201ENSMUST00000182991 1002 ntBASIC21.18■□□□□ 0.98
Nid2O88322 Gm8709-201ENSMUST00000183230 1012 ntBASIC21.18■□□□□ 0.98
Nid2O88322 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nid2O88322 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Nid2O88322 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nid2O88322 AC154572.2-201ENSMUST00000225105 997 ntBASIC21.18■□□□□ 0.98
Nid2O88322 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nid2O88322 Gm10293-201ENSMUST00000076317 1002 ntBASIC21.18■□□□□ 0.98
Nid2O88322 Gm6316-201ENSMUST00000082064 1020 ntBASIC21.18■□□□□ 0.98
Nid2O88322 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nid2O88322 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nid2O88322 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nid2O88322 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC21.18■□□□□ 0.98
Nid2O88322 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nid2O88322 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nid2O88322 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nid2O88322 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nid2O88322 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nid2O88322 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Nid2O88322 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Nid2O88322 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nid2O88322 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nid2O88322 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Nid2O88322 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nid2O88322 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
Nid2O88322 Gm17271-201ENSMUST00000165535 355 ntBASIC21.17■□□□□ 0.98
Nid2O88322 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC21.17■□□□□ 0.98
Nid2O88322 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nid2O88322 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nid2O88322 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC21.17■□□□□ 0.98
Nid2O88322 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nid2O88322 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nid2O88322 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC21.17■□□□□ 0.98
Nid2O88322 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nid2O88322 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Nid2O88322 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nid2O88322 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms