Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC21.15■□□□□ 0.98
Ubr1O70481 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC21.15■□□□□ 0.98
Ubr1O70481 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ubr1O70481 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ubr1O70481 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC21.15■□□□□ 0.98
Ubr1O70481 Gm37153-201ENSMUST00000193637 231 ntBASIC21.15■□□□□ 0.98
Ubr1O70481 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ubr1O70481 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ubr1O70481 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ubr1O70481 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC21.15■□□□□ 0.98
Ubr1O70481 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC21.15■□□□□ 0.98
Ubr1O70481 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ubr1O70481 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Ubr1O70481 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ubr1O70481 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ubr1O70481 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ubr1O70481 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ubr1O70481 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ubr1O70481 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ubr1O70481 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ubr1O70481 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ubr1O70481 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ubr1O70481 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.98
Ubr1O70481 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Ubr1O70481 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ubr1O70481 Gm43294-201ENSMUST00000202850 2490 ntBASIC21.14■□□□□ 0.97
Ubr1O70481 Gm24513-201ENSMUST00000174964 138 ntBASIC21.14■□□□□ 0.97
Ubr1O70481 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC21.14■□□□□ 0.97
Ubr1O70481 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ubr1O70481 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ubr1O70481 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC21.14■□□□□ 0.97
Ubr1O70481 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Ubr1O70481 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC21.14■□□□□ 0.97
Ubr1O70481 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC21.14■□□□□ 0.97
Ubr1O70481 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ubr1O70481 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ubr1O70481 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ubr1O70481 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ubr1O70481 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ubr1O70481 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC21.13■□□□□ 0.97
Ubr1O70481 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ubr1O70481 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ubr1O70481 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ubr1O70481 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ubr1O70481 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ubr1O70481 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC21.13■□□□□ 0.97
Ubr1O70481 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC21.13■□□□□ 0.97
Ubr1O70481 Gm2756-201ENSMUST00000195851 400 ntBASIC21.13■□□□□ 0.97
Ubr1O70481 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC21.13■□□□□ 0.97
Ubr1O70481 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ubr1O70481 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ubr1O70481 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ubr1O70481 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ubr1O70481 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Ubr1O70481 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ubr1O70481 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ubr1O70481 Mir3113-201ENSMUST00000175478 76 ntBASIC21.13■□□□□ 0.97
Ubr1O70481 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC21.13■□□□□ 0.97
Ubr1O70481 Gm45683-201ENSMUST00000210825 1247 ntBASIC21.13■□□□□ 0.97
Ubr1O70481 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ubr1O70481 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ubr1O70481 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ubr1O70481 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ubr1O70481 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ubr1O70481 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ubr1O70481 Gm5898-201ENSMUST00000121016 2071 ntBASIC21.12■□□□□ 0.97
Ubr1O70481 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
Ubr1O70481 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ubr1O70481 Gm6257-201ENSMUST00000163864 910 ntBASIC21.12■□□□□ 0.97
Ubr1O70481 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Ubr1O70481 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ubr1O70481 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ubr1O70481 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ubr1O70481 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ubr1O70481 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ubr1O70481 Gm6736-201ENSMUST00000166583 948 ntBASIC21.11■□□□□ 0.97
Ubr1O70481 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC21.11■□□□□ 0.97
Ubr1O70481 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ubr1O70481 Bloc1s5-203ENSMUST00000224902 612 ntBASIC21.11■□□□□ 0.97
Ubr1O70481 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ubr1O70481 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ubr1O70481 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ubr1O70481 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ubr1O70481 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Ubr1O70481 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ubr1O70481 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ubr1O70481 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC21.11■□□□□ 0.97
Ubr1O70481 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ubr1O70481 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ubr1O70481 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ubr1O70481 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ubr1O70481 Gm27300-201ENSMUST00000184085 97 ntBASIC21.1■□□□□ 0.97
Ubr1O70481 Gm27335-201ENSMUST00000184758 97 ntBASIC21.1■□□□□ 0.97
Ubr1O70481 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Ubr1O70481 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ubr1O70481 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Ubr1O70481 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ubr1O70481 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ubr1O70481 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ubr1O70481 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms