Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pdlim3O70209 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Pdlim3O70209 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pdlim3O70209 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pdlim3O70209 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pdlim3O70209 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pdlim3O70209 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pdlim3O70209 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pdlim3O70209 Gm12441-201ENSMUST00000121806 588 ntBASIC14.87□□□□□ -0.03
Pdlim3O70209 Gm15378-201ENSMUST00000121894 207 ntBASIC14.87□□□□□ -0.03
Pdlim3O70209 Gm38027-201ENSMUST00000192315 235 ntBASIC14.87□□□□□ -0.03
Pdlim3O70209 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pdlim3O70209 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Pdlim3O70209 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pdlim3O70209 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Pdlim3O70209 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pdlim3O70209 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Pdlim3O70209 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pdlim3O70209 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Pdlim3O70209 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Pdlim3O70209 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pdlim3O70209 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Pdlim3O70209 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdlim3O70209 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdlim3O70209 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdlim3O70209 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdlim3O70209 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdlim3O70209 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdlim3O70209 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdlim3O70209 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdlim3O70209 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdlim3O70209 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC14.86□□□□□ -0.03
Pdlim3O70209 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdlim3O70209 Gm37856-201ENSMUST00000191634 999 ntBASIC14.86□□□□□ -0.03
Pdlim3O70209 Trmt13-210ENSMUST00000198454 880 ntBASIC14.86□□□□□ -0.03
Pdlim3O70209 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Pdlim3O70209 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdlim3O70209 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdlim3O70209 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.86□□□□□ -0.03
Pdlim3O70209 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Pdlim3O70209 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdlim3O70209 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdlim3O70209 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.86□□□□□ -0.03
Pdlim3O70209 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdlim3O70209 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
Pdlim3O70209 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Pdlim3O70209 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdlim3O70209 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdlim3O70209 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdlim3O70209 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Pdlim3O70209 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdlim3O70209 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdlim3O70209 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pdlim3O70209 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdlim3O70209 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdlim3O70209 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pdlim3O70209 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Pdlim3O70209 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pdlim3O70209 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pdlim3O70209 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.85□□□□□ -0.03
Pdlim3O70209 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pdlim3O70209 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Pdlim3O70209 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pdlim3O70209 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pdlim3O70209 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pdlim3O70209 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pdlim3O70209 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pdlim3O70209 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pdlim3O70209 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pdlim3O70209 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
Pdlim3O70209 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pdlim3O70209 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Pdlim3O70209 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Pdlim3O70209 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pdlim3O70209 Gm7712-202ENSMUST00000222331 1510 ntBASIC14.85□□□□□ -0.03
Pdlim3O70209 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Pdlim3O70209 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pdlim3O70209 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pdlim3O70209 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pdlim3O70209 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pdlim3O70209 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pdlim3O70209 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim3O70209 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim3O70209 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim3O70209 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim3O70209 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim3O70209 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim3O70209 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.84□□□□□ -0.03
Pdlim3O70209 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim3O70209 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.84□□□□□ -0.03
Pdlim3O70209 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim3O70209 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim3O70209 Gm5643-201ENSMUST00000117081 966 ntBASIC14.84□□□□□ -0.03
Pdlim3O70209 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC14.84□□□□□ -0.03
Pdlim3O70209 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.84□□□□□ -0.03
Pdlim3O70209 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim3O70209 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim3O70209 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim3O70209 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim3O70209 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms