Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pja1O55176 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pja1O55176 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pja1O55176 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pja1O55176 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.3■□□□□ 0.36
Pja1O55176 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pja1O55176 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pja1O55176 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pja1O55176 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pja1O55176 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pja1O55176 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pja1O55176 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pja1O55176 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pja1O55176 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pja1O55176 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pja1O55176 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pja1O55176 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pja1O55176 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pja1O55176 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pja1O55176 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pja1O55176 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Pja1O55176 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Pja1O55176 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pja1O55176 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pja1O55176 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pja1O55176 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Pja1O55176 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pja1O55176 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pja1O55176 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Pja1O55176 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pja1O55176 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pja1O55176 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Pja1O55176 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.28■□□□□ 0.36
Pja1O55176 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pja1O55176 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.28■□□□□ 0.36
Pja1O55176 Gm11539-201ENSMUST00000119837 557 ntBASIC17.28■□□□□ 0.36
Pja1O55176 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.28■□□□□ 0.36
Pja1O55176 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pja1O55176 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pja1O55176 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pja1O55176 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Pja1O55176 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pja1O55176 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pja1O55176 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.28■□□□□ 0.36
Pja1O55176 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pja1O55176 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pja1O55176 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pja1O55176 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pja1O55176 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pja1O55176 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pja1O55176 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pja1O55176 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pja1O55176 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pja1O55176 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pja1O55176 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pja1O55176 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Pja1O55176 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Pja1O55176 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Pja1O55176 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pja1O55176 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pja1O55176 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pja1O55176 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pja1O55176 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pja1O55176 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pja1O55176 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pja1O55176 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pja1O55176 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pja1O55176 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pja1O55176 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pja1O55176 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pja1O55176 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pja1O55176 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
Pja1O55176 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pja1O55176 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.27■□□□□ 0.35
Pja1O55176 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Pja1O55176 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pja1O55176 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Pja1O55176 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pja1O55176 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Pja1O55176 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pja1O55176 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Pja1O55176 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Pja1O55176 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pja1O55176 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Pja1O55176 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pja1O55176 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pja1O55176 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pja1O55176 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.26■□□□□ 0.35
Pja1O55176 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Pja1O55176 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pja1O55176 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pja1O55176 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pja1O55176 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pja1O55176 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pja1O55176 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pja1O55176 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pja1O55176 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.26■□□□□ 0.35
Pja1O55176 Mir5122-201ENSMUST00000175004 89 ntBASIC17.26■□□□□ 0.35
Pja1O55176 Gm7370-201ENSMUST00000219471 767 ntBASIC17.26■□□□□ 0.35
Pja1O55176 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms