Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6dO55057 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6dO55057 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6dO55057 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6dO55057 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6dO55057 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC12.97□□□□□ -0.33
Pde6dO55057 Gm21956-201ENSMUST00000179946 522 ntBASIC12.97□□□□□ -0.33
Pde6dO55057 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6dO55057 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6dO55057 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Pde6dO55057 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6dO55057 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6dO55057 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Pde6dO55057 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC12.97□□□□□ -0.33
Pde6dO55057 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6dO55057 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6dO55057 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6dO55057 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6dO55057 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Pde6dO55057 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6dO55057 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pde6dO55057 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pde6dO55057 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pde6dO55057 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pde6dO55057 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pde6dO55057 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pde6dO55057 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pde6dO55057 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pde6dO55057 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pde6dO55057 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pde6dO55057 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC12.96□□□□□ -0.33
Pde6dO55057 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC12.96□□□□□ -0.33
Pde6dO55057 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC12.96□□□□□ -0.33
Pde6dO55057 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Pde6dO55057 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Pde6dO55057 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pde6dO55057 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pde6dO55057 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC12.96□□□□□ -0.33
Pde6dO55057 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pde6dO55057 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pde6dO55057 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Pde6dO55057 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pde6dO55057 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pde6dO55057 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pde6dO55057 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Pde6dO55057 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pde6dO55057 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Pde6dO55057 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Pde6dO55057 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Pde6dO55057 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Pde6dO55057 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pde6dO55057 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Pde6dO55057 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pde6dO55057 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pde6dO55057 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.96□□□□□ -0.34
Pde6dO55057 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pde6dO55057 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pde6dO55057 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pde6dO55057 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pde6dO55057 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pde6dO55057 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pde6dO55057 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pde6dO55057 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC12.95□□□□□ -0.34
Pde6dO55057 Gm6576-201ENSMUST00000169678 883 ntBASIC12.95□□□□□ -0.34
Pde6dO55057 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC12.95□□□□□ -0.34
Pde6dO55057 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pde6dO55057 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pde6dO55057 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pde6dO55057 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
Pde6dO55057 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pde6dO55057 CT010444.2-201ENSMUST00000217877 1629 ntBASIC12.95□□□□□ -0.34
Pde6dO55057 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pde6dO55057 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pde6dO55057 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pde6dO55057 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Pde6dO55057 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pde6dO55057 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Pde6dO55057 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pde6dO55057 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Pde6dO55057 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pde6dO55057 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pde6dO55057 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Pde6dO55057 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pde6dO55057 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pde6dO55057 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pde6dO55057 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Pde6dO55057 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC12.94□□□□□ -0.34
Pde6dO55057 Appbp2os-202ENSMUST00000206972 447 ntBASIC12.94□□□□□ -0.34
Pde6dO55057 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pde6dO55057 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Pde6dO55057 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pde6dO55057 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pde6dO55057 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pde6dO55057 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pde6dO55057 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pde6dO55057 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pde6dO55057 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pde6dO55057 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pde6dO55057 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pde6dO55057 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms