Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trdmt1O55055 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Trdmt1O55055 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Trdmt1O55055 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trdmt1O55055 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.99■□□□□ 0.47
Trdmt1O55055 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trdmt1O55055 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trdmt1O55055 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trdmt1O55055 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trdmt1O55055 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trdmt1O55055 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Trdmt1O55055 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trdmt1O55055 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trdmt1O55055 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trdmt1O55055 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trdmt1O55055 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Trdmt1O55055 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trdmt1O55055 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Trdmt1O55055 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.98■□□□□ 0.47
Trdmt1O55055 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Trdmt1O55055 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.98■□□□□ 0.47
Trdmt1O55055 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trdmt1O55055 Mir6404-201ENSMUST00000183699 94 ntBASIC17.98■□□□□ 0.47
Trdmt1O55055 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trdmt1O55055 CT943659.1-201ENSMUST00000215459 326 ntBASIC17.98■□□□□ 0.47
Trdmt1O55055 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.98■□□□□ 0.47
Trdmt1O55055 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trdmt1O55055 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trdmt1O55055 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Trdmt1O55055 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trdmt1O55055 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trdmt1O55055 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trdmt1O55055 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trdmt1O55055 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trdmt1O55055 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trdmt1O55055 Gm14494-201ENSMUST00000118786 435 ntBASIC17.97■□□□□ 0.47
Trdmt1O55055 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trdmt1O55055 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trdmt1O55055 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.97■□□□□ 0.47
Trdmt1O55055 Gm9727-201ENSMUST00000161387 555 ntBASIC17.97■□□□□ 0.47
Trdmt1O55055 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC17.97■□□□□ 0.47
Trdmt1O55055 Gm27702-201ENSMUST00000184512 56 ntBASIC17.97■□□□□ 0.47
Trdmt1O55055 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trdmt1O55055 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trdmt1O55055 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trdmt1O55055 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Trdmt1O55055 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trdmt1O55055 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trdmt1O55055 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trdmt1O55055 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Trdmt1O55055 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.97■□□□□ 0.47
Trdmt1O55055 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trdmt1O55055 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.96■□□□□ 0.47
Trdmt1O55055 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trdmt1O55055 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trdmt1O55055 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trdmt1O55055 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Trdmt1O55055 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trdmt1O55055 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
Trdmt1O55055 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trdmt1O55055 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trdmt1O55055 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trdmt1O55055 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.96■□□□□ 0.47
Trdmt1O55055 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trdmt1O55055 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trdmt1O55055 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trdmt1O55055 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trdmt1O55055 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.96■□□□□ 0.47
Trdmt1O55055 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Trdmt1O55055 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Trdmt1O55055 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trdmt1O55055 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trdmt1O55055 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trdmt1O55055 AC131586.3-201ENSMUST00000228355 1367 ntBASIC17.95■□□□□ 0.46
Trdmt1O55055 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.95■□□□□ 0.46
Trdmt1O55055 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trdmt1O55055 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trdmt1O55055 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC17.95■□□□□ 0.46
Trdmt1O55055 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trdmt1O55055 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC17.95■□□□□ 0.46
Trdmt1O55055 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Trdmt1O55055 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC17.95■□□□□ 0.46
Trdmt1O55055 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC17.95■□□□□ 0.46
Trdmt1O55055 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trdmt1O55055 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC17.95■□□□□ 0.46
Trdmt1O55055 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.95■□□□□ 0.46
Trdmt1O55055 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC17.95■□□□□ 0.46
Trdmt1O55055 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trdmt1O55055 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trdmt1O55055 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trdmt1O55055 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trdmt1O55055 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trdmt1O55055 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trdmt1O55055 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trdmt1O55055 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trdmt1O55055 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trdmt1O55055 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trdmt1O55055 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trdmt1O55055 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Trdmt1O55055 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms