Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cldn5O54942 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cldn5O54942 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cldn5O54942 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cldn5O54942 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Cldn5O54942 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cldn5O54942 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Cldn5O54942 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cldn5O54942 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cldn5O54942 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Cldn5O54942 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cldn5O54942 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cldn5O54942 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
Cldn5O54942 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cldn5O54942 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.96■□□□□ 0.31
Cldn5O54942 Gm15372-201ENSMUST00000120729 834 ntBASIC16.96■□□□□ 0.31
Cldn5O54942 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cldn5O54942 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.96■□□□□ 0.31
Cldn5O54942 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.96■□□□□ 0.31
Cldn5O54942 Rprl3-201ENSMUST00000157400 290 ntBASIC16.96■□□□□ 0.31
Cldn5O54942 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cldn5O54942 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cldn5O54942 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cldn5O54942 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cldn5O54942 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Cldn5O54942 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Cldn5O54942 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cldn5O54942 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cldn5O54942 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cldn5O54942 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cldn5O54942 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cldn5O54942 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cldn5O54942 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cldn5O54942 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.96■□□□□ 0.3
Cldn5O54942 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Cldn5O54942 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cldn5O54942 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Cldn5O54942 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn5O54942 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn5O54942 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.95■□□□□ 0.3
Cldn5O54942 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn5O54942 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn5O54942 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Cldn5O54942 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn5O54942 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.95■□□□□ 0.3
Cldn5O54942 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.95■□□□□ 0.3
Cldn5O54942 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn5O54942 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn5O54942 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.95■□□□□ 0.3
Cldn5O54942 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn5O54942 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn5O54942 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn5O54942 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn5O54942 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
Cldn5O54942 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn5O54942 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Cldn5O54942 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn5O54942 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn5O54942 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn5O54942 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn5O54942 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Cldn5O54942 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Cldn5O54942 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn5O54942 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn5O54942 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.94■□□□□ 0.3
Cldn5O54942 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.94■□□□□ 0.3
Cldn5O54942 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Cldn5O54942 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.94■□□□□ 0.3
Cldn5O54942 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.94■□□□□ 0.3
Cldn5O54942 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.94■□□□□ 0.3
Cldn5O54942 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.94■□□□□ 0.3
Cldn5O54942 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.94■□□□□ 0.3
Cldn5O54942 Gm7461-201ENSMUST00000058918 827 ntBASIC16.94■□□□□ 0.3
Cldn5O54942 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn5O54942 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn5O54942 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn5O54942 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn5O54942 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn5O54942 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.94■□□□□ 0.3
Cldn5O54942 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn5O54942 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn5O54942 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn5O54942 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Cldn5O54942 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn5O54942 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn5O54942 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn5O54942 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn5O54942 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn5O54942 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.93■□□□□ 0.3
Cldn5O54942 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn5O54942 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn5O54942 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn5O54942 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn5O54942 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn5O54942 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn5O54942 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
Cldn5O54942 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn5O54942 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.93■□□□□ 0.3
Cldn5O54942 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
Cldn5O54942 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms