Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
ChkaO54804 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ChkaO54804 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ChkaO54804 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ChkaO54804 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ChkaO54804 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.55■□□□□ 0.24
ChkaO54804 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ChkaO54804 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ChkaO54804 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
ChkaO54804 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ChkaO54804 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ChkaO54804 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ChkaO54804 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ChkaO54804 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ChkaO54804 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.55■□□□□ 0.24
ChkaO54804 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.55■□□□□ 0.24
ChkaO54804 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
ChkaO54804 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ChkaO54804 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
ChkaO54804 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ChkaO54804 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ChkaO54804 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
ChkaO54804 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
ChkaO54804 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
ChkaO54804 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ChkaO54804 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
ChkaO54804 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
ChkaO54804 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.54■□□□□ 0.24
ChkaO54804 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ChkaO54804 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.54■□□□□ 0.24
ChkaO54804 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.54■□□□□ 0.24
ChkaO54804 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
ChkaO54804 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ChkaO54804 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ChkaO54804 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
ChkaO54804 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
ChkaO54804 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ChkaO54804 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ChkaO54804 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ChkaO54804 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.54■□□□□ 0.24
ChkaO54804 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ChkaO54804 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ChkaO54804 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ChkaO54804 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ChkaO54804 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ChkaO54804 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ChkaO54804 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ChkaO54804 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.53■□□□□ 0.24
ChkaO54804 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.53■□□□□ 0.24
ChkaO54804 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.53■□□□□ 0.24
ChkaO54804 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ChkaO54804 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ChkaO54804 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
ChkaO54804 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ChkaO54804 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ChkaO54804 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ChkaO54804 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ChkaO54804 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ChkaO54804 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ChkaO54804 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
ChkaO54804 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.53■□□□□ 0.24
ChkaO54804 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.53■□□□□ 0.24
ChkaO54804 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.53■□□□□ 0.24
ChkaO54804 Gm2274-201ENSMUST00000184539 609 ntBASIC16.53■□□□□ 0.24
ChkaO54804 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ChkaO54804 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.53■□□□□ 0.24
ChkaO54804 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ChkaO54804 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ChkaO54804 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
ChkaO54804 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ChkaO54804 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ChkaO54804 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ChkaO54804 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
ChkaO54804 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ChkaO54804 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.53■□□□□ 0.24
ChkaO54804 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
ChkaO54804 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ChkaO54804 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ChkaO54804 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ChkaO54804 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
ChkaO54804 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
ChkaO54804 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.52■□□□□ 0.24
ChkaO54804 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ChkaO54804 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
ChkaO54804 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ChkaO54804 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.52■□□□□ 0.24
ChkaO54804 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
ChkaO54804 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
ChkaO54804 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ChkaO54804 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.52■□□□□ 0.24
ChkaO54804 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
ChkaO54804 Gm16061-201ENSMUST00000122167 857 ntBASIC16.52■□□□□ 0.24
ChkaO54804 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
ChkaO54804 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ChkaO54804 Gm18421-201ENSMUST00000204122 625 ntBASIC16.52■□□□□ 0.24
ChkaO54804 Gm7213-201ENSMUST00000215977 950 ntBASIC16.52■□□□□ 0.24
ChkaO54804 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ChkaO54804 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ChkaO54804 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ChkaO54804 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms