Protein–RNA interactions for Protein: O35690

Phox2b, Paired mesoderm homeobox protein 2B, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2bO35690 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Phox2bO35690 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Phox2bO35690 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Phox2bO35690 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Phox2bO35690 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Phox2bO35690 Gm13418-201ENSMUST00000119097 944 ntBASIC16.41■□□□□ 0.22
Phox2bO35690 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Phox2bO35690 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC16.41■□□□□ 0.22
Phox2bO35690 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC16.41■□□□□ 0.22
Phox2bO35690 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Phox2bO35690 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Phox2bO35690 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Phox2bO35690 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Phox2bO35690 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Phox2bO35690 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Phox2bO35690 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Phox2bO35690 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Phox2bO35690 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Phox2bO35690 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.41■□□□□ 0.22
Phox2bO35690 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Phox2bO35690 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Phox2bO35690 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Phox2bO35690 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.4■□□□□ 0.22
Phox2bO35690 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Phox2bO35690 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Phox2bO35690 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Phox2bO35690 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
Phox2bO35690 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Phox2bO35690 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC16.4■□□□□ 0.22
Phox2bO35690 Gm4913-201ENSMUST00000117075 1290 ntBASIC16.4■□□□□ 0.22
Phox2bO35690 Gm13312-201ENSMUST00000119631 718 ntBASIC16.4■□□□□ 0.22
Phox2bO35690 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.4■□□□□ 0.22
Phox2bO35690 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.4■□□□□ 0.22
Phox2bO35690 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Phox2bO35690 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.4■□□□□ 0.22
Phox2bO35690 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.4■□□□□ 0.22
Phox2bO35690 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.4■□□□□ 0.22
Phox2bO35690 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.4■□□□□ 0.22
Phox2bO35690 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Phox2bO35690 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Phox2bO35690 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Phox2bO35690 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Phox2bO35690 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Phox2bO35690 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Phox2bO35690 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Phox2bO35690 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Phox2bO35690 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC16.4■□□□□ 0.22
Phox2bO35690 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.4■□□□□ 0.22
Phox2bO35690 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Phox2bO35690 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.4■□□□□ 0.22
Phox2bO35690 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Phox2bO35690 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Phox2bO35690 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Phox2bO35690 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Phox2bO35690 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Phox2bO35690 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Phox2bO35690 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Phox2bO35690 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Phox2bO35690 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Phox2bO35690 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.39■□□□□ 0.21
Phox2bO35690 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Phox2bO35690 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Phox2bO35690 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.39■□□□□ 0.21
Phox2bO35690 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Phox2bO35690 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Phox2bO35690 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Phox2bO35690 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Phox2bO35690 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Phox2bO35690 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Phox2bO35690 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Phox2bO35690 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC16.39■□□□□ 0.21
Phox2bO35690 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Phox2bO35690 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.39■□□□□ 0.21
Phox2bO35690 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.39■□□□□ 0.21
Phox2bO35690 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Phox2bO35690 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
Phox2bO35690 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Phox2bO35690 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Phox2bO35690 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Phox2bO35690 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Phox2bO35690 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Phox2bO35690 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Phox2bO35690 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Phox2bO35690 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC16.39■□□□□ 0.21
Phox2bO35690 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Phox2bO35690 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Phox2bO35690 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Phox2bO35690 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Phox2bO35690 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Phox2bO35690 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Phox2bO35690 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Phox2bO35690 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Phox2bO35690 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Phox2bO35690 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.38■□□□□ 0.21
Phox2bO35690 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC16.38■□□□□ 0.21
Phox2bO35690 Gm20949-201ENSMUST00000206478 952 ntBASIC16.38■□□□□ 0.21
Phox2bO35690 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Phox2bO35690 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Phox2bO35690 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Phox2bO35690 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms