Protein–RNA interactions for Protein: O35655

Ppef1, Serine/threonine-protein phosphatase with EF-hands 1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppef1O35655 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.19■□□□□ 0.66
Ppef1O35655 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ppef1O35655 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ppef1O35655 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ppef1O35655 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ppef1O35655 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ppef1O35655 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ppef1O35655 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ppef1O35655 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
Ppef1O35655 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ppef1O35655 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ppef1O35655 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Ppef1O35655 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ppef1O35655 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Ppef1O35655 Gm18057-201ENSMUST00000208220 503 ntBASIC19.18■□□□□ 0.66
Ppef1O35655 AC124732.1-201ENSMUST00000221551 910 ntBASIC19.18■□□□□ 0.66
Ppef1O35655 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ppef1O35655 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ppef1O35655 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Ppef1O35655 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ppef1O35655 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ppef1O35655 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ppef1O35655 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ppef1O35655 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Ppef1O35655 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ppef1O35655 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ppef1O35655 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ppef1O35655 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ppef1O35655 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ppef1O35655 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ppef1O35655 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ppef1O35655 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ppef1O35655 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
Ppef1O35655 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ppef1O35655 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ppef1O35655 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Ppef1O35655 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ppef1O35655 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.17■□□□□ 0.66
Ppef1O35655 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Ppef1O35655 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ppef1O35655 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Ppef1O35655 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ppef1O35655 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ppef1O35655 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ppef1O35655 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC19.17■□□□□ 0.66
Ppef1O35655 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ppef1O35655 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ppef1O35655 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC19.16■□□□□ 0.66
Ppef1O35655 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ppef1O35655 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ppef1O35655 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ppef1O35655 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ppef1O35655 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ppef1O35655 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ppef1O35655 Gm11185-201ENSMUST00000117732 1007 ntBASIC19.16■□□□□ 0.66
Ppef1O35655 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Ppef1O35655 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ppef1O35655 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Ppef1O35655 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ppef1O35655 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ppef1O35655 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ppef1O35655 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ppef1O35655 Gm14719-201ENSMUST00000121891 340 ntBASIC19.15■□□□□ 0.66
Ppef1O35655 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC19.15■□□□□ 0.66
Ppef1O35655 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Ppef1O35655 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ppef1O35655 Thap2-203ENSMUST00000218989 527 ntBASIC19.15■□□□□ 0.66
Ppef1O35655 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ppef1O35655 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ppef1O35655 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ppef1O35655 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ppef1O35655 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ppef1O35655 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC19.15■□□□□ 0.66
Ppef1O35655 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Ppef1O35655 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ppef1O35655 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC19.14■□□□□ 0.66
Ppef1O35655 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ppef1O35655 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Ppef1O35655 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
Ppef1O35655 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC19.14■□□□□ 0.65
Ppef1O35655 Rpph1-201ENSMUST00000175096 319 ntBASIC19.14■□□□□ 0.65
Ppef1O35655 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ppef1O35655 Gm8515-201ENSMUST00000194852 576 ntBASIC19.14■□□□□ 0.65
Ppef1O35655 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC19.14■□□□□ 0.65
Ppef1O35655 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ppef1O35655 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Ppef1O35655 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ppef1O35655 Gm3365-201ENSMUST00000216296 1480 ntBASIC19.14■□□□□ 0.65
Ppef1O35655 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC19.14■□□□□ 0.65
Ppef1O35655 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ppef1O35655 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ppef1O35655 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ppef1O35655 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ppef1O35655 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ppef1O35655 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ppef1O35655 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC19.13■□□□□ 0.65
Ppef1O35655 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC19.13■□□□□ 0.65
Ppef1O35655 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Ppef1O35655 Syt7-204ENSMUST00000223586 1344 ntBASIC19.13■□□□□ 0.65
Ppef1O35655 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms