Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.33■□□□□ 0.04
Abca4O35600 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Abca4O35600 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Abca4O35600 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Abca4O35600 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Abca4O35600 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Abca4O35600 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Abca4O35600 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Abca4O35600 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC15.32■□□□□ 0.04
Abca4O35600 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Abca4O35600 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Abca4O35600 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Abca4O35600 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC15.32■□□□□ 0.04
Abca4O35600 Gm18889-201ENSMUST00000174284 929 ntBASIC15.32■□□□□ 0.04
Abca4O35600 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Abca4O35600 AC153962.4-201ENSMUST00000217878 242 ntBASIC15.32■□□□□ 0.04
Abca4O35600 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Abca4O35600 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Abca4O35600 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.32■□□□□ 0.04
Abca4O35600 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Abca4O35600 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Abca4O35600 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Abca4O35600 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Abca4O35600 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Abca4O35600 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC15.32■□□□□ 0.04
Abca4O35600 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Abca4O35600 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Abca4O35600 Gm17837-201ENSMUST00000186435 985 ntBASIC15.32■□□□□ 0.04
Abca4O35600 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC15.32■□□□□ 0.04
Abca4O35600 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Abca4O35600 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Abca4O35600 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.32■□□□□ 0.04
Abca4O35600 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Abca4O35600 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Abca4O35600 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Abca4O35600 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Abca4O35600 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC15.31■□□□□ 0.04
Abca4O35600 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Abca4O35600 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Abca4O35600 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC15.31■□□□□ 0.04
Abca4O35600 Gm37277-201ENSMUST00000194052 1111 ntBASIC15.31■□□□□ 0.04
Abca4O35600 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Abca4O35600 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Abca4O35600 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Abca4O35600 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Abca4O35600 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Abca4O35600 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Abca4O35600 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Abca4O35600 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Abca4O35600 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.31■□□□□ 0.04
Abca4O35600 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Abca4O35600 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Abca4O35600 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.31■□□□□ 0.04
Abca4O35600 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC15.31■□□□□ 0.04
Abca4O35600 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Abca4O35600 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Abca4O35600 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Abca4O35600 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Abca4O35600 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Abca4O35600 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Abca4O35600 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Abca4O35600 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Abca4O35600 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Abca4O35600 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Abca4O35600 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Abca4O35600 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Abca4O35600 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Abca4O35600 Gm43213-201ENSMUST00000151866 1790 ntBASIC15.3■□□□□ 0.04
Abca4O35600 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Abca4O35600 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.3■□□□□ 0.04
Abca4O35600 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Abca4O35600 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Abca4O35600 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Abca4O35600 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Abca4O35600 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.3■□□□□ 0.04
Abca4O35600 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.3■□□□□ 0.04
Abca4O35600 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Abca4O35600 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Abca4O35600 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC15.3■□□□□ 0.04
Abca4O35600 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Abca4O35600 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Abca4O35600 Gm38319-201ENSMUST00000194537 1266 ntBASIC15.3■□□□□ 0.04
Abca4O35600 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Abca4O35600 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.3■□□□□ 0.04
Abca4O35600 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Abca4O35600 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Abca4O35600 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Abca4O35600 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Abca4O35600 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.3■□□□□ 0.04
Abca4O35600 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Abca4O35600 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Abca4O35600 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Abca4O35600 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Abca4O35600 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Abca4O35600 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Abca4O35600 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Abca4O35600 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC15.29■□□□□ 0.04
Abca4O35600 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Abca4O35600 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Abca4O35600 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms