Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clcn6O35454 Gm37863-201ENSMUST00000194911 1457 ntBASIC17.56■□□□□ 0.4
Clcn6O35454 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clcn6O35454 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clcn6O35454 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Clcn6O35454 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Clcn6O35454 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clcn6O35454 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clcn6O35454 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Clcn6O35454 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clcn6O35454 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clcn6O35454 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Clcn6O35454 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.55■□□□□ 0.4
Clcn6O35454 Gm14126-201ENSMUST00000122345 395 ntBASIC17.55■□□□□ 0.4
Clcn6O35454 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Clcn6O35454 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Clcn6O35454 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC17.55■□□□□ 0.4
Clcn6O35454 Mir8112-201ENSMUST00000184382 131 ntBASIC17.55■□□□□ 0.4
Clcn6O35454 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.55■□□□□ 0.4
Clcn6O35454 Gm37017-201ENSMUST00000195266 747 ntBASIC17.55■□□□□ 0.4
Clcn6O35454 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clcn6O35454 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Clcn6O35454 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clcn6O35454 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clcn6O35454 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clcn6O35454 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clcn6O35454 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clcn6O35454 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clcn6O35454 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Clcn6O35454 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.55■□□□□ 0.4
Clcn6O35454 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clcn6O35454 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clcn6O35454 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.55■□□□□ 0.4
Clcn6O35454 Gm42479-201ENSMUST00000198654 1356 ntBASIC17.54■□□□□ 0.4
Clcn6O35454 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clcn6O35454 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clcn6O35454 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clcn6O35454 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Clcn6O35454 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.54■□□□□ 0.4
Clcn6O35454 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clcn6O35454 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Clcn6O35454 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clcn6O35454 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Clcn6O35454 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC17.54■□□□□ 0.4
Clcn6O35454 Gm44830-201ENSMUST00000207667 584 ntBASIC17.54■□□□□ 0.4
Clcn6O35454 Gm45359-201ENSMUST00000210635 427 ntBASIC17.54■□□□□ 0.4
Clcn6O35454 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Clcn6O35454 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clcn6O35454 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clcn6O35454 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
Clcn6O35454 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.54■□□□□ 0.4
Clcn6O35454 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clcn6O35454 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Clcn6O35454 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Clcn6O35454 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clcn6O35454 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clcn6O35454 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.53■□□□□ 0.4
Clcn6O35454 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clcn6O35454 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clcn6O35454 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Clcn6O35454 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clcn6O35454 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Clcn6O35454 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Clcn6O35454 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Clcn6O35454 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clcn6O35454 Gm5643-201ENSMUST00000117081 966 ntBASIC17.53■□□□□ 0.4
Clcn6O35454 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC17.53■□□□□ 0.4
Clcn6O35454 Gm44251-201ENSMUST00000204963 442 ntBASIC17.53■□□□□ 0.4
Clcn6O35454 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clcn6O35454 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clcn6O35454 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Clcn6O35454 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clcn6O35454 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clcn6O35454 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.53■□□□□ 0.4
Clcn6O35454 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clcn6O35454 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clcn6O35454 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Clcn6O35454 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Clcn6O35454 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clcn6O35454 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clcn6O35454 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clcn6O35454 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Clcn6O35454 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clcn6O35454 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clcn6O35454 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clcn6O35454 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Clcn6O35454 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Clcn6O35454 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clcn6O35454 Gm10418-201ENSMUST00000100943 576 ntBASIC17.52■□□□□ 0.4
Clcn6O35454 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Clcn6O35454 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC17.52■□□□□ 0.4
Clcn6O35454 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC17.52■□□□□ 0.4
Clcn6O35454 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.52■□□□□ 0.4
Clcn6O35454 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Clcn6O35454 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.52■□□□□ 0.4
Clcn6O35454 Gm12702-201ENSMUST00000123258 612 ntTSL 3 BASIC17.52■□□□□ 0.4
Clcn6O35454 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Clcn6O35454 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clcn6O35454 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clcn6O35454 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms