Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col15a1O35206 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Col15a1O35206 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Col15a1O35206 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col15a1O35206 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col15a1O35206 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Col15a1O35206 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col15a1O35206 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Col15a1O35206 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Col15a1O35206 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col15a1O35206 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Col15a1O35206 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Col15a1O35206 Gm11873-201ENSMUST00000117877 1304 ntBASIC20.91■□□□□ 0.94
Col15a1O35206 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC20.91■□□□□ 0.94
Col15a1O35206 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col15a1O35206 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col15a1O35206 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC20.9■□□□□ 0.94
Col15a1O35206 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col15a1O35206 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col15a1O35206 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col15a1O35206 Gm2308-201ENSMUST00000166539 1004 ntBASIC20.9■□□□□ 0.94
Col15a1O35206 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col15a1O35206 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC20.9■□□□□ 0.94
Col15a1O35206 Bloc1s5-203ENSMUST00000224902 612 ntBASIC20.9■□□□□ 0.94
Col15a1O35206 AC117588.1-201ENSMUST00000228510 999 ntBASIC20.9■□□□□ 0.94
Col15a1O35206 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col15a1O35206 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col15a1O35206 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col15a1O35206 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Col15a1O35206 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col15a1O35206 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Col15a1O35206 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Col15a1O35206 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Col15a1O35206 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Col15a1O35206 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Col15a1O35206 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Col15a1O35206 Gm11841-201ENSMUST00000117060 1963 ntBASIC20.89■□□□□ 0.93
Col15a1O35206 Gm4609-201ENSMUST00000106443 1002 ntBASIC20.89■□□□□ 0.93
Col15a1O35206 Gm5138-201ENSMUST00000113842 1002 ntBASIC20.89■□□□□ 0.93
Col15a1O35206 Gm15191-201ENSMUST00000117933 1000 ntBASIC20.89■□□□□ 0.93
Col15a1O35206 Gm12182-201ENSMUST00000118655 1008 ntBASIC20.89■□□□□ 0.93
Col15a1O35206 Gm13882-201ENSMUST00000120886 1002 ntBASIC20.89■□□□□ 0.93
Col15a1O35206 Gm10284-201ENSMUST00000145057 1005 ntBASIC20.89■□□□□ 0.93
Col15a1O35206 Gm10481-201ENSMUST00000179228 1002 ntBASIC20.89■□□□□ 0.93
Col15a1O35206 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC20.89■□□□□ 0.93
Col15a1O35206 Gm2574-201ENSMUST00000181051 1002 ntBASIC20.89■□□□□ 0.93
Col15a1O35206 Gm3200-201ENSMUST00000181493 1002 ntBASIC20.89■□□□□ 0.93
Col15a1O35206 Gm8825-201ENSMUST00000182565 998 ntBASIC20.89■□□□□ 0.93
Col15a1O35206 Gm4518-201ENSMUST00000182638 718 ntBASIC20.89■□□□□ 0.93
Col15a1O35206 Gm8330-201ENSMUST00000182754 1008 ntBASIC20.89■□□□□ 0.93
Col15a1O35206 Gm4575-201ENSMUST00000182991 1002 ntBASIC20.89■□□□□ 0.93
Col15a1O35206 Gm8709-201ENSMUST00000183230 1012 ntBASIC20.89■□□□□ 0.93
Col15a1O35206 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col15a1O35206 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col15a1O35206 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col15a1O35206 Gm10293-201ENSMUST00000076317 1002 ntBASIC20.89■□□□□ 0.93
Col15a1O35206 Gm6316-201ENSMUST00000082064 1020 ntBASIC20.89■□□□□ 0.93
Col15a1O35206 Gm5648-201ENSMUST00000122244 1587 ntBASIC20.89■□□□□ 0.93
Col15a1O35206 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Col15a1O35206 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col15a1O35206 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col15a1O35206 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col15a1O35206 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col15a1O35206 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col15a1O35206 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.89■□□□□ 0.93
Col15a1O35206 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col15a1O35206 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Col15a1O35206 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC20.88■□□□□ 0.93
Col15a1O35206 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col15a1O35206 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col15a1O35206 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Col15a1O35206 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
Col15a1O35206 Mir8117-201ENSMUST00000184773 107 ntBASIC20.88■□□□□ 0.93
Col15a1O35206 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC20.88■□□□□ 0.93
Col15a1O35206 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC20.88■□□□□ 0.93
Col15a1O35206 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Col15a1O35206 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Col15a1O35206 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC20.88■□□□□ 0.93
Col15a1O35206 Ndufaf2-202ENSMUST00000223734 556 ntBASIC20.88■□□□□ 0.93
Col15a1O35206 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Col15a1O35206 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col15a1O35206 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col15a1O35206 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col15a1O35206 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col15a1O35206 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC20.88■□□□□ 0.93
Col15a1O35206 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col15a1O35206 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col15a1O35206 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col15a1O35206 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Col15a1O35206 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col15a1O35206 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col15a1O35206 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col15a1O35206 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col15a1O35206 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col15a1O35206 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC20.87■□□□□ 0.93
Col15a1O35206 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Col15a1O35206 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col15a1O35206 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col15a1O35206 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col15a1O35206 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms