Protein–RNA interactions for Protein: O09165

Casq1, Calsequestrin-1, mousemouse

Predictions only

Length 405 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casq1O09165 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Casq1O09165 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Casq1O09165 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Casq1O09165 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Casq1O09165 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Casq1O09165 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Casq1O09165 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Casq1O09165 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Casq1O09165 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Casq1O09165 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Casq1O09165 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Casq1O09165 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Casq1O09165 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Casq1O09165 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Casq1O09165 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
Casq1O09165 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Casq1O09165 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Casq1O09165 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Casq1O09165 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Casq1O09165 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
Casq1O09165 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.44■□□□□ 0.7
Casq1O09165 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
Casq1O09165 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Casq1O09165 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Casq1O09165 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Casq1O09165 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Casq1O09165 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
Casq1O09165 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC19.44■□□□□ 0.7
Casq1O09165 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Casq1O09165 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Casq1O09165 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Casq1O09165 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Casq1O09165 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Casq1O09165 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Casq1O09165 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Casq1O09165 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Casq1O09165 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Casq1O09165 Gm38027-201ENSMUST00000192315 235 ntBASIC19.43■□□□□ 0.7
Casq1O09165 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Casq1O09165 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Casq1O09165 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Casq1O09165 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Casq1O09165 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Casq1O09165 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Casq1O09165 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Casq1O09165 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Casq1O09165 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.42■□□□□ 0.7
Casq1O09165 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Casq1O09165 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Casq1O09165 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Casq1O09165 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Casq1O09165 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Casq1O09165 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Casq1O09165 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.42■□□□□ 0.7
Casq1O09165 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Casq1O09165 Gm44616-201ENSMUST00000206417 1732 ntBASIC19.42■□□□□ 0.7
Casq1O09165 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Casq1O09165 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Casq1O09165 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Casq1O09165 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Casq1O09165 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Casq1O09165 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Casq1O09165 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Casq1O09165 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Casq1O09165 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Casq1O09165 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Casq1O09165 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Casq1O09165 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.41■□□□□ 0.7
Casq1O09165 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Casq1O09165 Trmt13-210ENSMUST00000198454 880 ntBASIC19.41■□□□□ 0.7
Casq1O09165 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Casq1O09165 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Casq1O09165 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Casq1O09165 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Casq1O09165 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Casq1O09165 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Casq1O09165 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Casq1O09165 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Casq1O09165 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Casq1O09165 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Casq1O09165 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Casq1O09165 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Casq1O09165 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Casq1O09165 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Casq1O09165 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Casq1O09165 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Casq1O09165 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Casq1O09165 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Casq1O09165 Gm15378-201ENSMUST00000121894 207 ntBASIC19.4■□□□□ 0.7
Casq1O09165 Gm37856-201ENSMUST00000191634 999 ntBASIC19.4■□□□□ 0.7
Casq1O09165 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Casq1O09165 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Casq1O09165 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Casq1O09165 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Casq1O09165 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Casq1O09165 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Casq1O09165 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Casq1O09165 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.4■□□□□ 0.7
Casq1O09165 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Casq1O09165 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms