Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ercc2O08811 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ercc2O08811 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Ercc2O08811 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ercc2O08811 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ercc2O08811 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ercc2O08811 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ercc2O08811 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ercc2O08811 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Ercc2O08811 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ercc2O08811 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ercc2O08811 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ercc2O08811 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ercc2O08811 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ercc2O08811 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Ercc2O08811 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Ercc2O08811 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ercc2O08811 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.76■□□□□ 0.27
Ercc2O08811 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.76■□□□□ 0.27
Ercc2O08811 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ercc2O08811 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ercc2O08811 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Ercc2O08811 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Ercc2O08811 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ercc2O08811 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ercc2O08811 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ercc2O08811 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ercc2O08811 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.76■□□□□ 0.27
Ercc2O08811 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ercc2O08811 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ercc2O08811 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ercc2O08811 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ercc2O08811 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ercc2O08811 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Ercc2O08811 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ercc2O08811 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Ercc2O08811 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ercc2O08811 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Ercc2O08811 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Ercc2O08811 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.75■□□□□ 0.27
Ercc2O08811 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ercc2O08811 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ercc2O08811 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.75■□□□□ 0.27
Ercc2O08811 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ercc2O08811 Gm29518-201ENSMUST00000190858 372 ntBASIC16.75■□□□□ 0.27
Ercc2O08811 Gm36967-201ENSMUST00000193814 266 ntBASIC16.75■□□□□ 0.27
Ercc2O08811 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.75■□□□□ 0.27
Ercc2O08811 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Ercc2O08811 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Ercc2O08811 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.75■□□□□ 0.27
Ercc2O08811 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.75■□□□□ 0.27
Ercc2O08811 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ercc2O08811 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Ercc2O08811 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ercc2O08811 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ercc2O08811 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ercc2O08811 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.75■□□□□ 0.27
Ercc2O08811 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ercc2O08811 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Ercc2O08811 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ercc2O08811 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ercc2O08811 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ercc2O08811 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ercc2O08811 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ercc2O08811 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ercc2O08811 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ercc2O08811 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ercc2O08811 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ercc2O08811 Gm17808-201ENSMUST00000200859 894 ntBASIC16.74■□□□□ 0.27
Ercc2O08811 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ercc2O08811 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ercc2O08811 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ercc2O08811 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ercc2O08811 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.74■□□□□ 0.27
Ercc2O08811 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ercc2O08811 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ercc2O08811 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ercc2O08811 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ercc2O08811 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ercc2O08811 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ercc2O08811 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ercc2O08811 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Ercc2O08811 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Ercc2O08811 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.74■□□□□ 0.27
Ercc2O08811 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ercc2O08811 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ercc2O08811 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ercc2O08811 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ercc2O08811 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ercc2O08811 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ercc2O08811 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ercc2O08811 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ercc2O08811 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ercc2O08811 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
Ercc2O08811 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ercc2O08811 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ercc2O08811 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ercc2O08811 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ercc2O08811 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.73■□□□□ 0.27
Ercc2O08811 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms