Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp35M0QWN7 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp35M0QWN7 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Usp35M0QWN7 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp35M0QWN7 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Usp35M0QWN7 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp35M0QWN7 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp35M0QWN7 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp35M0QWN7 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.55■□□□□ 0.4
Usp35M0QWN7 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp35M0QWN7 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp35M0QWN7 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.55■□□□□ 0.4
Usp35M0QWN7 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.55■□□□□ 0.4
Usp35M0QWN7 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp35M0QWN7 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp35M0QWN7 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Usp35M0QWN7 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp35M0QWN7 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Usp35M0QWN7 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp35M0QWN7 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp35M0QWN7 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Usp35M0QWN7 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.54■□□□□ 0.4
Usp35M0QWN7 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp35M0QWN7 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp35M0QWN7 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Usp35M0QWN7 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp35M0QWN7 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Usp35M0QWN7 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.54■□□□□ 0.4
Usp35M0QWN7 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.54■□□□□ 0.4
Usp35M0QWN7 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.54■□□□□ 0.4
Usp35M0QWN7 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Usp35M0QWN7 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Usp35M0QWN7 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.54■□□□□ 0.4
Usp35M0QWN7 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp35M0QWN7 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp35M0QWN7 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp35M0QWN7 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp35M0QWN7 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp35M0QWN7 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp35M0QWN7 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp35M0QWN7 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp35M0QWN7 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp35M0QWN7 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp35M0QWN7 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp35M0QWN7 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Usp35M0QWN7 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp35M0QWN7 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp35M0QWN7 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp35M0QWN7 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp35M0QWN7 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.53■□□□□ 0.4
Usp35M0QWN7 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp35M0QWN7 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.53■□□□□ 0.4
Usp35M0QWN7 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp35M0QWN7 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp35M0QWN7 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Usp35M0QWN7 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Usp35M0QWN7 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp35M0QWN7 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Usp35M0QWN7 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp35M0QWN7 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp35M0QWN7 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Usp35M0QWN7 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Usp35M0QWN7 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Usp35M0QWN7 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp35M0QWN7 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp35M0QWN7 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Usp35M0QWN7 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Usp35M0QWN7 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp35M0QWN7 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp35M0QWN7 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp35M0QWN7 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp35M0QWN7 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp35M0QWN7 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Usp35M0QWN7 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Usp35M0QWN7 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.52■□□□□ 0.39
Usp35M0QWN7 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
Usp35M0QWN7 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp35M0QWN7 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Usp35M0QWN7 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Usp35M0QWN7 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Usp35M0QWN7 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Usp35M0QWN7 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp35M0QWN7 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp35M0QWN7 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Usp35M0QWN7 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp35M0QWN7 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp35M0QWN7 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Usp35M0QWN7 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp35M0QWN7 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp35M0QWN7 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp35M0QWN7 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Usp35M0QWN7 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp35M0QWN7 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.5■□□□□ 0.39
Usp35M0QWN7 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp35M0QWN7 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp35M0QWN7 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp35M0QWN7 Gm11336-201ENSMUST00000118168 334 ntBASIC17.5■□□□□ 0.39
Usp35M0QWN7 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Usp35M0QWN7 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Usp35M0QWN7 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms