Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shisa8J3QNX5 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
Shisa8J3QNX5 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shisa8J3QNX5 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shisa8J3QNX5 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shisa8J3QNX5 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shisa8J3QNX5 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shisa8J3QNX5 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shisa8J3QNX5 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.98□□□□□ -0.01
Shisa8J3QNX5 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Shisa8J3QNX5 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Shisa8J3QNX5 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC14.98□□□□□ -0.01
Shisa8J3QNX5 Gm8495-201ENSMUST00000188740 694 ntBASIC14.98□□□□□ -0.01
Shisa8J3QNX5 Gm37025-201ENSMUST00000195159 829 ntBASIC14.98□□□□□ -0.01
Shisa8J3QNX5 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Shisa8J3QNX5 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC14.98□□□□□ -0.01
Shisa8J3QNX5 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC14.98□□□□□ -0.01
Shisa8J3QNX5 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC14.98□□□□□ -0.01
Shisa8J3QNX5 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Shisa8J3QNX5 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shisa8J3QNX5 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shisa8J3QNX5 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shisa8J3QNX5 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shisa8J3QNX5 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shisa8J3QNX5 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shisa8J3QNX5 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shisa8J3QNX5 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
Shisa8J3QNX5 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
Shisa8J3QNX5 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.97□□□□□ -0.01
Shisa8J3QNX5 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Shisa8J3QNX5 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shisa8J3QNX5 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shisa8J3QNX5 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shisa8J3QNX5 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shisa8J3QNX5 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shisa8J3QNX5 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shisa8J3QNX5 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Shisa8J3QNX5 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shisa8J3QNX5 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Shisa8J3QNX5 Slc35b2-207ENSMUST00000226086 850 ntBASIC14.97□□□□□ -0.01
Shisa8J3QNX5 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Shisa8J3QNX5 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Shisa8J3QNX5 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shisa8J3QNX5 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Shisa8J3QNX5 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shisa8J3QNX5 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shisa8J3QNX5 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shisa8J3QNX5 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shisa8J3QNX5 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shisa8J3QNX5 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shisa8J3QNX5 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Shisa8J3QNX5 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.97□□□□□ -0.01
Shisa8J3QNX5 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Shisa8J3QNX5 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shisa8J3QNX5 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shisa8J3QNX5 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shisa8J3QNX5 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shisa8J3QNX5 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Shisa8J3QNX5 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shisa8J3QNX5 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shisa8J3QNX5 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shisa8J3QNX5 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shisa8J3QNX5 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Shisa8J3QNX5 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
Shisa8J3QNX5 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shisa8J3QNX5 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shisa8J3QNX5 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shisa8J3QNX5 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC14.96□□□□□ -0.01
Shisa8J3QNX5 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Shisa8J3QNX5 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Shisa8J3QNX5 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shisa8J3QNX5 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shisa8J3QNX5 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shisa8J3QNX5 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shisa8J3QNX5 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shisa8J3QNX5 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shisa8J3QNX5 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shisa8J3QNX5 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Shisa8J3QNX5 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Shisa8J3QNX5 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.96□□□□□ -0.01
Shisa8J3QNX5 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
Shisa8J3QNX5 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Shisa8J3QNX5 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Shisa8J3QNX5 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.96□□□□□ -0.02
Shisa8J3QNX5 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Shisa8J3QNX5 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.95□□□□□ -0.02
Shisa8J3QNX5 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shisa8J3QNX5 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shisa8J3QNX5 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Shisa8J3QNX5 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.95□□□□□ -0.02
Shisa8J3QNX5 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shisa8J3QNX5 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
Shisa8J3QNX5 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shisa8J3QNX5 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shisa8J3QNX5 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC14.95□□□□□ -0.02
Shisa8J3QNX5 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shisa8J3QNX5 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shisa8J3QNX5 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC14.95□□□□□ -0.02
Shisa8J3QNX5 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Shisa8J3QNX5 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms