Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trav13d-3J3QMG8 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Trav13d-3J3QMG8 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13d-3J3QMG8 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Trav13d-3J3QMG8 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13d-3J3QMG8 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13d-3J3QMG8 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13d-3J3QMG8 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13d-3J3QMG8 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13d-3J3QMG8 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.41□□□□□ -0.1
Trav13d-3J3QMG8 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13d-3J3QMG8 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13d-3J3QMG8 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.41□□□□□ -0.1
Trav13d-3J3QMG8 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13d-3J3QMG8 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13d-3J3QMG8 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13d-3J3QMG8 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.41□□□□□ -0.1
Trav13d-3J3QMG8 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trav13d-3J3QMG8 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13d-3J3QMG8 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13d-3J3QMG8 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.41□□□□□ -0.1
Trav13d-3J3QMG8 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13d-3J3QMG8 AC121577.1-201ENSMUST00000227302 707 ntBASIC14.41□□□□□ -0.1
Trav13d-3J3QMG8 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13d-3J3QMG8 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13d-3J3QMG8 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trav13d-3J3QMG8 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Trav13d-3J3QMG8 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13d-3J3QMG8 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13d-3J3QMG8 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13d-3J3QMG8 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13d-3J3QMG8 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13d-3J3QMG8 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13d-3J3QMG8 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13d-3J3QMG8 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13d-3J3QMG8 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13d-3J3QMG8 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trav13d-3J3QMG8 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13d-3J3QMG8 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.4□□□□□ -0.1
Trav13d-3J3QMG8 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13d-3J3QMG8 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13d-3J3QMG8 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.4□□□□□ -0.1
Trav13d-3J3QMG8 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13d-3J3QMG8 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trav13d-3J3QMG8 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.4□□□□□ -0.1
Trav13d-3J3QMG8 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13d-3J3QMG8 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
Trav13d-3J3QMG8 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trav13d-3J3QMG8 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13d-3J3QMG8 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13d-3J3QMG8 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13d-3J3QMG8 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13d-3J3QMG8 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trav13d-3J3QMG8 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13d-3J3QMG8 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13d-3J3QMG8 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13d-3J3QMG8 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13d-3J3QMG8 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Trav13d-3J3QMG8 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13d-3J3QMG8 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Trav13d-3J3QMG8 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13d-3J3QMG8 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13d-3J3QMG8 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trav13d-3J3QMG8 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13d-3J3QMG8 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13d-3J3QMG8 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13d-3J3QMG8 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trav13d-3J3QMG8 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13d-3J3QMG8 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13d-3J3QMG8 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav13d-3J3QMG8 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav13d-3J3QMG8 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav13d-3J3QMG8 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Trav13d-3J3QMG8 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13d-3J3QMG8 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13d-3J3QMG8 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav13d-3J3QMG8 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13d-3J3QMG8 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13d-3J3QMG8 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13d-3J3QMG8 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13d-3J3QMG8 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13d-3J3QMG8 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13d-3J3QMG8 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Trav13d-3J3QMG8 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13d-3J3QMG8 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13d-3J3QMG8 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trav13d-3J3QMG8 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13d-3J3QMG8 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13d-3J3QMG8 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trav13d-3J3QMG8 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13d-3J3QMG8 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav13d-3J3QMG8 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13d-3J3QMG8 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13d-3J3QMG8 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13d-3J3QMG8 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13d-3J3QMG8 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.38□□□□□ -0.11
Trav13d-3J3QMG8 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13d-3J3QMG8 Gm36967-201ENSMUST00000193814 266 ntBASIC14.38□□□□□ -0.11
Trav13d-3J3QMG8 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.38□□□□□ -0.11
Trav13d-3J3QMG8 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms