Protein–RNA interactions for Protein: H3BKP8

9930021J03Rik, RIKEN cDNA 9930021J03 gene, mousemouse

Predictions only

Length 2,027 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
9930021J03RikH3BKP8 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
9930021J03RikH3BKP8 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
9930021J03RikH3BKP8 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
9930021J03RikH3BKP8 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
9930021J03RikH3BKP8 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.28■□□□□ 0.04
9930021J03RikH3BKP8 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
9930021J03RikH3BKP8 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
9930021J03RikH3BKP8 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
9930021J03RikH3BKP8 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
9930021J03RikH3BKP8 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
9930021J03RikH3BKP8 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
9930021J03RikH3BKP8 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
9930021J03RikH3BKP8 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
9930021J03RikH3BKP8 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
9930021J03RikH3BKP8 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
9930021J03RikH3BKP8 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.27■□□□□ 0.04
9930021J03RikH3BKP8 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.27■□□□□ 0.04
9930021J03RikH3BKP8 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
9930021J03RikH3BKP8 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
9930021J03RikH3BKP8 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
9930021J03RikH3BKP8 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
9930021J03RikH3BKP8 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
9930021J03RikH3BKP8 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
9930021J03RikH3BKP8 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
9930021J03RikH3BKP8 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
9930021J03RikH3BKP8 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
9930021J03RikH3BKP8 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.27■□□□□ 0.04
9930021J03RikH3BKP8 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
9930021J03RikH3BKP8 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
9930021J03RikH3BKP8 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
9930021J03RikH3BKP8 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
9930021J03RikH3BKP8 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.27■□□□□ 0.03
9930021J03RikH3BKP8 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
9930021J03RikH3BKP8 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
9930021J03RikH3BKP8 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
9930021J03RikH3BKP8 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
9930021J03RikH3BKP8 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
9930021J03RikH3BKP8 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
9930021J03RikH3BKP8 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
9930021J03RikH3BKP8 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
9930021J03RikH3BKP8 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
9930021J03RikH3BKP8 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.26■□□□□ 0.03
9930021J03RikH3BKP8 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
9930021J03RikH3BKP8 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
9930021J03RikH3BKP8 Gm45328-201ENSMUST00000210942 917 ntBASIC15.26■□□□□ 0.03
9930021J03RikH3BKP8 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
9930021J03RikH3BKP8 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
9930021J03RikH3BKP8 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
9930021J03RikH3BKP8 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.26■□□□□ 0.03
9930021J03RikH3BKP8 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
9930021J03RikH3BKP8 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
9930021J03RikH3BKP8 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
9930021J03RikH3BKP8 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
9930021J03RikH3BKP8 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
9930021J03RikH3BKP8 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
9930021J03RikH3BKP8 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.26■□□□□ 0.03
9930021J03RikH3BKP8 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.26■□□□□ 0.03
9930021J03RikH3BKP8 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.26■□□□□ 0.03
9930021J03RikH3BKP8 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
9930021J03RikH3BKP8 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
9930021J03RikH3BKP8 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
9930021J03RikH3BKP8 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
9930021J03RikH3BKP8 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
9930021J03RikH3BKP8 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
9930021J03RikH3BKP8 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
9930021J03RikH3BKP8 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
9930021J03RikH3BKP8 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
9930021J03RikH3BKP8 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
9930021J03RikH3BKP8 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
9930021J03RikH3BKP8 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
9930021J03RikH3BKP8 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
9930021J03RikH3BKP8 Gm13216-201ENSMUST00000117145 591 ntBASIC15.25■□□□□ 0.03
9930021J03RikH3BKP8 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.25■□□□□ 0.03
9930021J03RikH3BKP8 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.25■□□□□ 0.03
9930021J03RikH3BKP8 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
9930021J03RikH3BKP8 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
9930021J03RikH3BKP8 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
9930021J03RikH3BKP8 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.25■□□□□ 0.03
9930021J03RikH3BKP8 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
9930021J03RikH3BKP8 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
9930021J03RikH3BKP8 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
9930021J03RikH3BKP8 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
9930021J03RikH3BKP8 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
9930021J03RikH3BKP8 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
9930021J03RikH3BKP8 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
9930021J03RikH3BKP8 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
9930021J03RikH3BKP8 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
9930021J03RikH3BKP8 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
9930021J03RikH3BKP8 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
9930021J03RikH3BKP8 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
9930021J03RikH3BKP8 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
9930021J03RikH3BKP8 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.24■□□□□ 0.03
9930021J03RikH3BKP8 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
9930021J03RikH3BKP8 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
9930021J03RikH3BKP8 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
9930021J03RikH3BKP8 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
9930021J03RikH3BKP8 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
9930021J03RikH3BKP8 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
9930021J03RikH3BKP8 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
9930021J03RikH3BKP8 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms