Protein–RNA interactions for Protein: G3X8Z7

Chrna9, Cholinergic receptor, nicotinic, alpha polypeptide 9, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna9G3X8Z7 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Chrna9G3X8Z7 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chrna9G3X8Z7 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chrna9G3X8Z7 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chrna9G3X8Z7 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.6■□□□□ 0.41
Chrna9G3X8Z7 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Chrna9G3X8Z7 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.6■□□□□ 0.41
Chrna9G3X8Z7 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chrna9G3X8Z7 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chrna9G3X8Z7 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chrna9G3X8Z7 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.6■□□□□ 0.41
Chrna9G3X8Z7 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chrna9G3X8Z7 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Chrna9G3X8Z7 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chrna9G3X8Z7 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.6■□□□□ 0.41
Chrna9G3X8Z7 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Chrna9G3X8Z7 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chrna9G3X8Z7 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chrna9G3X8Z7 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Chrna9G3X8Z7 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chrna9G3X8Z7 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chrna9G3X8Z7 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chrna9G3X8Z7 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chrna9G3X8Z7 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.59■□□□□ 0.41
Chrna9G3X8Z7 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chrna9G3X8Z7 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chrna9G3X8Z7 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chrna9G3X8Z7 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chrna9G3X8Z7 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chrna9G3X8Z7 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chrna9G3X8Z7 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chrna9G3X8Z7 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chrna9G3X8Z7 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chrna9G3X8Z7 Gm37722-201ENSMUST00000193757 208 ntBASIC17.59■□□□□ 0.41
Chrna9G3X8Z7 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.59■□□□□ 0.41
Chrna9G3X8Z7 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
Chrna9G3X8Z7 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.59■□□□□ 0.41
Chrna9G3X8Z7 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chrna9G3X8Z7 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chrna9G3X8Z7 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chrna9G3X8Z7 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chrna9G3X8Z7 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chrna9G3X8Z7 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chrna9G3X8Z7 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chrna9G3X8Z7 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chrna9G3X8Z7 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chrna9G3X8Z7 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Chrna9G3X8Z7 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chrna9G3X8Z7 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chrna9G3X8Z7 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chrna9G3X8Z7 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chrna9G3X8Z7 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chrna9G3X8Z7 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chrna9G3X8Z7 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chrna9G3X8Z7 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Chrna9G3X8Z7 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chrna9G3X8Z7 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.58■□□□□ 0.4
Chrna9G3X8Z7 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Chrna9G3X8Z7 Gm21559-201ENSMUST00000220638 855 ntBASIC17.58■□□□□ 0.4
Chrna9G3X8Z7 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chrna9G3X8Z7 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chrna9G3X8Z7 Gm8587-201ENSMUST00000076538 843 ntBASIC17.58■□□□□ 0.4
Chrna9G3X8Z7 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chrna9G3X8Z7 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chrna9G3X8Z7 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chrna9G3X8Z7 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chrna9G3X8Z7 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chrna9G3X8Z7 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Chrna9G3X8Z7 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna9G3X8Z7 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna9G3X8Z7 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna9G3X8Z7 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Chrna9G3X8Z7 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.57■□□□□ 0.4
Chrna9G3X8Z7 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Chrna9G3X8Z7 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna9G3X8Z7 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna9G3X8Z7 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna9G3X8Z7 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna9G3X8Z7 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Chrna9G3X8Z7 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Chrna9G3X8Z7 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.57■□□□□ 0.4
Chrna9G3X8Z7 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna9G3X8Z7 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.57■□□□□ 0.4
Chrna9G3X8Z7 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Chrna9G3X8Z7 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Chrna9G3X8Z7 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.57■□□□□ 0.4
Chrna9G3X8Z7 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna9G3X8Z7 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna9G3X8Z7 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna9G3X8Z7 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna9G3X8Z7 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna9G3X8Z7 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna9G3X8Z7 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna9G3X8Z7 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna9G3X8Z7 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna9G3X8Z7 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna9G3X8Z7 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna9G3X8Z7 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna9G3X8Z7 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Chrna9G3X8Z7 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms