Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh9F8VPK8 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh9F8VPK8 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh9F8VPK8 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh9F8VPK8 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh9F8VPK8 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh9F8VPK8 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh9F8VPK8 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh9F8VPK8 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Pcdh9F8VPK8 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Pcdh9F8VPK8 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh9F8VPK8 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh9F8VPK8 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh9F8VPK8 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.8■□□□□ 0.28
Pcdh9F8VPK8 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh9F8VPK8 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Pcdh9F8VPK8 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Pcdh9F8VPK8 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh9F8VPK8 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh9F8VPK8 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh9F8VPK8 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh9F8VPK8 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh9F8VPK8 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh9F8VPK8 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh9F8VPK8 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh9F8VPK8 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh9F8VPK8 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh9F8VPK8 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh9F8VPK8 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Pcdh9F8VPK8 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh9F8VPK8 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh9F8VPK8 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh9F8VPK8 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh9F8VPK8 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.79■□□□□ 0.28
Pcdh9F8VPK8 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh9F8VPK8 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
Pcdh9F8VPK8 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh9F8VPK8 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh9F8VPK8 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh9F8VPK8 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh9F8VPK8 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.79■□□□□ 0.28
Pcdh9F8VPK8 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.78■□□□□ 0.28
Pcdh9F8VPK8 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh9F8VPK8 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh9F8VPK8 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh9F8VPK8 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh9F8VPK8 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Pcdh9F8VPK8 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh9F8VPK8 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh9F8VPK8 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh9F8VPK8 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh9F8VPK8 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh9F8VPK8 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh9F8VPK8 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Pcdh9F8VPK8 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.78■□□□□ 0.28
Pcdh9F8VPK8 Mir6982-201ENSMUST00000184354 68 ntBASIC16.78■□□□□ 0.28
Pcdh9F8VPK8 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.78■□□□□ 0.28
Pcdh9F8VPK8 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh9F8VPK8 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh9F8VPK8 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh9F8VPK8 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh9F8VPK8 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.78■□□□□ 0.28
Pcdh9F8VPK8 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh9F8VPK8 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Pcdh9F8VPK8 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh9F8VPK8 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh9F8VPK8 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh9F8VPK8 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh9F8VPK8 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
Pcdh9F8VPK8 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh9F8VPK8 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh9F8VPK8 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.77■□□□□ 0.28
Pcdh9F8VPK8 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
Pcdh9F8VPK8 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh9F8VPK8 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh9F8VPK8 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh9F8VPK8 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh9F8VPK8 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.77■□□□□ 0.28
Pcdh9F8VPK8 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.77■□□□□ 0.28
Pcdh9F8VPK8 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.77■□□□□ 0.28
Pcdh9F8VPK8 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh9F8VPK8 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.77■□□□□ 0.28
Pcdh9F8VPK8 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.77■□□□□ 0.27
Pcdh9F8VPK8 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdh9F8VPK8 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh9F8VPK8 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh9F8VPK8 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh9F8VPK8 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh9F8VPK8 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Pcdh9F8VPK8 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.76■□□□□ 0.27
Pcdh9F8VPK8 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh9F8VPK8 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Pcdh9F8VPK8 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh9F8VPK8 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh9F8VPK8 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh9F8VPK8 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh9F8VPK8 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh9F8VPK8 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.76■□□□□ 0.27
Pcdh9F8VPK8 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh9F8VPK8 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms